RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 FAAP100Q0VG06 881 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 LCP2Q13094 533 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TARDBPQ13148 414 aaKnown RBP eCLIP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TNFAIP1Q13829 316 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 DPYSL3Q14195 570 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 HSDL1Q3SXM5 330 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ATPAF1Q5TC12 328 aaPredicted RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CDC73Q6P1J9 531 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 PGBD2Q6P3X8 592 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 CYP20A1Q6UW02 462 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 HDDC2Q7Z4H3 204 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 MON1AQ86VX9 555 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ATCAYQ86WG3 371 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ZBTB8OSQ8IWT0 167 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 THEM5Q8N1Q8 247 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 RCBTB1Q8NDN9 531 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ST7LQ8TDW4 575 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 MUL1Q969V5 352 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ISG20Q96AZ6 181 aaKnown RBP6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 SSX3Q99909 188 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ACBD6Q9BR61 282 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 MFFQ9GZY8 342 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 PORCNQ9H237 461 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 TMEM134Q9H6X4 195 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF302Q9NR11 478 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 SORCS3Q9UPU3 1222 aa6.45□□□□□ -1.38
TM9SF4-202ENST00000398022 A0A075B6Q4 140 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 FKBP6O75344 327 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 PRKD3O94806 890 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 H2AFB2P0C5Z0 115 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 SUPT20HL2P0C7V6 817 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 NT5EP21589 574 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ATP5C1P36542 298 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 TFAMQ00059 246 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF45Q02386 682 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ILF2Q12905 390 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 TSTA3Q13630 321 aaPredicted RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ALKBH1Q13686 389 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 DGCR6Q14129 220 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 KRT81Q14533 505 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 HKDC1Q2TB90 917 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 TRIM16LQ309B1 348 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 PLA1AQ53H76 456 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 JADE1Q6IE81 842 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 DHRS4L2Q6PKH6 230 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 PET117Q6UWS5 81 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ZPBP2Q6X784 338 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 SSX9Q7RTT3 188 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 TRMT11Q7Z4G4 463 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 CCDC60Q8IWA6 550 aaPredicted RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 CNTN4Q8IWV2 1026 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 DDIASQ8IXT1 998 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 C12orf29Q8N999 325 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 BHLHE23Q8NDY6 225 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 CPEB3Q8NE35 698 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 OR5B17Q8NGF7 314 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 OR5M1Q8NGP8 315 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 OR6Q1Q8NGQ2 317 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 CPNE4Q96A23 557 aaPredicted RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 MTERF3Q96E29 417 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 LINGO1Q96FE5 620 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 CYP2S1Q96SQ9 504 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 MRPL4Q9BYD3 311 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 METTL8Q9H825 291 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 LRFN1Q9P244 771 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 NCKAP1Q9Y2A7 1128 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 MFHAS1Q9Y4C4 1052 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 MAU2Q9Y6X3 613 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 A0A0B4J293 547 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ARHGAP42A6NI28 874 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 RHBDL1O75783 438 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 PRKCBP05771 671 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 S100PP25815 95 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ACTR1BP42025 376 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ALDH3B1P43353 468 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 UAP1L1Q3KQV9 507 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 MSS51Q4VC12 460 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 TCHHL1Q5QJ38 904 aaPredicted RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 SCARA5Q6ZMJ2 495 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ULK2Q8IYT8 1036 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 PRPF31Q8WWY3 499 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 RNF31Q96EP0 1072 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 DUS3LQ96G46 650 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ZBTB45Q96K62 511 aaPredicted RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 LRFN5Q96NI6 719 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM129BQ96TA1 746 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 PELOQ9BRX2 385 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 DUSP26Q9BV47 211 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 TP63Q9H3D4 680 aaPredicted RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 MINDY3Q9H8M7 445 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 IFT46Q9NQC8 304 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 USP36Q9P275 1121 aaKnown RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 SAE1Q9UBE0 346 aaPredicted RBP6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 ENPP5Q9UJA9 477 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 POU2F3Q9UKI9 436 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 MAP4K5Q9Y4K4 846 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 A6NL46 340 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 C22orf46C9J442 243 aa6.44□□□□□ -1.38
TM9SF4-202ENST00000398022 LRCH4O75427 683 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms