RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 HOMER3Q9NSC5 361 aa15.53■□□□□ 0.08
CXCL12-206ENST00000395795 FLNCQ14315 2725 aa15.53■□□□□ 0.08
CXCL12-206ENST00000395795 SHANK1Q9Y566 2161 aa15.53■□□□□ 0.08
CXCL12-206ENST00000395795 FITM1A5D6W6 292 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 OGNP20774 298 aaKnown RBP15.52■□□□□ 0.08
CXCL12-206ENST00000395795 COILP38432 576 aaPredicted RBP15.52■□□□□ 0.08
CXCL12-206ENST00000395795 DCDP81605 110 aaKnown RBP15.52■□□□□ 0.08
CXCL12-206ENST00000395795 SLC9A5Q14940 896 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 TMED2Q15363 201 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 CYP2A13Q16696 494 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 NKAIN1Q4KMZ8 207 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 ANKRD20A4Q4UJ75 823 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 ACSBG2Q5FVE4 666 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 ARMC3Q5W041 872 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 ZNF549Q6P9A3 640 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 PPP1R32Q7Z5V6 425 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 RBMXL3Q8N7X1 1067 aaKnown RBP15.52■□□□□ 0.08
CXCL12-206ENST00000395795 TEX19Q8NA77 164 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 FAM136AQ96C01 138 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 TCF12Q99081 682 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 CRYL1Q9Y2S2 319 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 JRKLQ9Y4A0 524 aa15.52■□□□□ 0.08
CXCL12-206ENST00000395795 FAM237BA0A1B0GVD1 139 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 ARHGEF33A8MVX0 844 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 C9J4A7 227 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 MAP3K7O43318 606 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 ESR1P03372 595 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 RPN2P04844 631 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 MLNP12872 115 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 AGXTP21549 392 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 ATP5DP30049 168 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 CLCN7P51798 805 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 PGDP52209 483 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 SSPNQ14714 243 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 MLIPQ5VWP3 458 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 MRNIPQ6NTE8 343 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 NEPROQ6NW34 567 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 MED25Q71SY5 747 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 OTOAQ7RTW8 1153 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 HOOK3Q86VS8 718 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 DENND6AQ8IWF6 608 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 NAT8LQ8N9F0 302 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 TMEM102Q8N9M5 508 aaPredicted RBP15.51■□□□□ 0.07
CXCL12-206ENST00000395795 OR2Y1Q8NGV0 311 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.51■□□□□ 0.07
CXCL12-206ENST00000395795 MAGOHBQ96A72 148 aaKnown RBP15.51■□□□□ 0.07
CXCL12-206ENST00000395795 RAD51AP1Q96B01 352 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 SIGLEC10Q96LC7 697 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 SERPINB12Q96P63 405 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 SMAD5Q99717 465 aaKnown RBP15.51■□□□□ 0.07
CXCL12-206ENST00000395795 SRPK3Q9UPE1 567 aa15.51■□□□□ 0.07
CXCL12-206ENST00000395795 PTRH2Q9Y3E5 179 aaKnown RBP15.51■□□□□ 0.07
CXCL12-206ENST00000395795 LOC105369274A0A096LPK9 316 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 IGKV1-8A0A0C4DH67 115 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 LOC102723532A0A0G2JNH3 316 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 KPNA5O15131 536 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 ZNF185O15231 689 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 KDM1AO60341 852 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 PSIP1O75475 530 aaKnown RBP15.5■□□□□ 0.07
CXCL12-206ENST00000395795 TIAL1Q01085 375 aaKnown RBP eCLIP15.5■□□□□ 0.07
CXCL12-206ENST00000395795 SF1Q15637 639 aaKnown RBP15.5■□□□□ 0.07
CXCL12-206ENST00000395795 FRMPD2BQ6IN97 320 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 CNSTQ6PJW8 725 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 OR4N4Q8N0Y3 316 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 OR2L3Q8NG85 312 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 SLC22A18Q96BI1 424 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 PBKQ96KB5 322 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 SPSB2Q99619 263 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 MIPEPQ99797 713 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 MESP1Q9BRJ9 268 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 SLC7A5P2Q9GIP4 190 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 KCNF1Q9H3M0 494 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 PLAC1Q9HBJ0 212 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 SLC6A20Q9NP91 592 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 PCM1Q15154 2024 aa15.5■□□□□ 0.07
CXCL12-206ENST00000395795 COL12A1Q99715 3063 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 OR2A25A4D2G3 310 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 TARM1B6A8C7 271 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 GOLGA8MH3BSY2 632 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 MYO1CO00159 1063 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 FKBP9O95302 570 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 PKMP14618 531 aaKnown RBP15.49■□□□□ 0.07
CXCL12-206ENST00000395795 OTX2P32243 289 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 PRR30Q53SZ7 412 aaPredicted RBP15.49■□□□□ 0.07
CXCL12-206ENST00000395795 RNF187Q5TA31 235 aaPredicted RBP15.49■□□□□ 0.07
CXCL12-206ENST00000395795 FBXO42Q6P3S6 717 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 CCDC137Q6PK04 289 aaKnown RBP15.49■□□□□ 0.07
CXCL12-206ENST00000395795 CYHR1Q6ZMK1 362 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 TTLL10Q6ZVT0 673 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 RNF44Q7L0R7 432 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 SDCCAG8Q86SQ7 713 aaPredicted RBP15.49■□□□□ 0.07
CXCL12-206ENST00000395795 LRRC56Q8IYG6 542 aaPredicted RBP15.49■□□□□ 0.07
CXCL12-206ENST00000395795 SLC35F6Q8N357 371 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 ARHGEF39Q8N4T4 335 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 N4BP2L2Q92802 583 aaPredicted RBP15.49■□□□□ 0.07
CXCL12-206ENST00000395795 ZUFSPQ96AP4 578 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 RAB11FIP5Q9BXF6 653 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 SLC26A1Q9H2B4 701 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 CUTCQ9NTM9 273 aa15.49■□□□□ 0.07
CXCL12-206ENST00000395795 P4HTMQ9NXG6 502 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms