RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TYMPP19971 482 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 SLC11A1P49279 550 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 PRKAG1P54619 331 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 CAP1Q01518 475 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 ALDH6A1Q02252 535 aaKnown RBP12.91□□□□□ -0.34
NFKB1-202ENST00000394820 DDI2Q5TDH0 399 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 FUT10Q6P4F1 479 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 TP53INP1Q96A56 240 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 BARD1Q99728 777 aaKnown RBP12.91□□□□□ -0.34
NFKB1-202ENST00000394820 C11orf16Q9NQ32 467 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 ARMC1Q9NVT9 282 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 PTBP2Q9UKA9 531 aaKnown RBP12.91□□□□□ -0.34
NFKB1-202ENST00000394820 PADI4Q9UM07 663 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 MAP4K5Q9Y4K4 846 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 RGRP47804 291 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 ALDH7A1P49419 539 aaKnown RBP12.91□□□□□ -0.34
NFKB1-202ENST00000394820 IHHQ14623 411 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 UGT3A2Q3SY77 523 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 LCN8Q6JVE9 175 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 GOLGA7Q7Z5G4 137 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 TMEM126BQ8IUX1 230 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 CADM3Q8N126 398 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 TMEM151AQ8N4L1 468 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 OR9Q1Q8NGQ5 310 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 WDR36Q8NI36 951 aaKnown RBP12.91□□□□□ -0.34
NFKB1-202ENST00000394820 IMP4Q96G21 291 aaKnown RBP12.91□□□□□ -0.34
NFKB1-202ENST00000394820 UROC1Q96N76 676 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 ZNF347Q96SE7 839 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 INPP5KQ9BT40 448 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 SCML2Q9UQR0 700 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 SOX14O95416 240 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 UMPSP11172 480 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 CKMT1AP12532 417 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 ATP5C1P36542 298 aaKnown RBP12.91□□□□□ -0.34
NFKB1-202ENST00000394820 RFX3P48380 749 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 EEFSECP57772 596 aaKnown RBP12.91□□□□□ -0.34
NFKB1-202ENST00000394820 NKX3-2P78367 333 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 EMX1Q04741 257 aaPredicted RBP12.91□□□□□ -0.34
NFKB1-202ENST00000394820 TIGD6Q17RP2 521 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 SYTL3Q4VX76 610 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 KDELC1Q6UW63 502 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 SERPINA9Q86WD7 417 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 PELI3Q8N2H9 469 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 PACRGLQ8N7B6 248 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 PROKR1Q8TCW9 393 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 PPP1R2P1Q96PQ5 205 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 INIPQ9NRY2 104 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 AIG1Q9NVV5 245 aa12.91□□□□□ -0.34
NFKB1-202ENST00000394820 PAK1IP1Q9NWT1 392 aaPredicted RBP12.91□□□□□ -0.34
NFKB1-202ENST00000394820 MRPS7Q9Y2R9 242 aaKnown RBP12.91□□□□□ -0.34
NFKB1-202ENST00000394820 LRRC37A2A6NM11 1700 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 MTMR11A4FU01 709 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 FXYD1O00168 92 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 FPGTO14772 594 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 SERPINB7O75635 380 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 PHC1P78364 1004 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 ZC3H12BQ5HYM0 836 aaKnown RBP12.9□□□□□ -0.34
NFKB1-202ENST00000394820 CYP4Z1Q86W10 505 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 TICAM1Q8IUC6 712 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 TRUB1Q8WWH5 349 aaKnown RBP12.9□□□□□ -0.34
NFKB1-202ENST00000394820 FUBP1Q96AE4 644 aaKnown RBP12.9□□□□□ -0.34
NFKB1-202ENST00000394820 SH3KBP1Q96B97 665 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 COPS8Q99627 209 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 ARHGEF9O43307 516 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 ADRA1AP35348 466 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 MLLT10P55197 1068 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 ILF2Q12905 390 aaKnown RBP12.9□□□□□ -0.34
NFKB1-202ENST00000394820 ZFP69Q49AA0 526 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 USP39Q53GS9 565 aaKnown RBP12.9□□□□□ -0.34
NFKB1-202ENST00000394820 INO80DQ53TQ3 878 aaPredicted RBP12.9□□□□□ -0.34
NFKB1-202ENST00000394820 ARMCX4Q5H9R4 360 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 PDZK1Q5T2W1 519 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 MSANTD2Q6P1R3 559 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 COLGALT2Q8IYK4 626 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 S100ZQ8WXG8 99 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 KIAA1191Q96A73 305 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 TCF25Q9BQ70 676 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 AASDHPPTQ9NRN7 309 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 TAS2R16Q9NYV7 291 aa12.9□□□□□ -0.34
NFKB1-202ENST00000394820 IFRD1O00458 451 aaPredicted RBP12.9□□□□□ -0.35
NFKB1-202ENST00000394820 PSIP1O75475 530 aaKnown RBP12.9□□□□□ -0.35
NFKB1-202ENST00000394820 EPORP19235 508 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 TNNI3P19429 210 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 CRHBPP24387 322 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 EPHA2P29317 976 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 KIR3DL1P43629 444 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 RPIAP49247 311 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 TUFMP49411 452 aaKnown RBP12.9□□□□□ -0.35
NFKB1-202ENST00000394820 DSC3Q14574 896 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 TPRG1LQ5T0D9 272 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 BORAQ6PGQ7 559 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 ARMC8Q8IUR7 673 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 RGL4Q8IZJ4 473 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 DEPDC4Q8N2C3 294 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 VPS37AQ8NEZ2 397 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 ZNF420Q8TAQ5 688 aaPredicted RBP12.9□□□□□ -0.35
NFKB1-202ENST00000394820 SLC22A17Q8WUG5 538 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 TFB2MQ9H5Q4 396 aaKnown RBP12.9□□□□□ -0.35
NFKB1-202ENST00000394820 TREX1Q9NSU2 369 aa12.9□□□□□ -0.35
NFKB1-202ENST00000394820 LZTS3O60299 673 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms