RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 MS4A2Q01362 244 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 HSPA14Q0VDF9 509 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 MADCAM1Q13477 382 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 CBX2Q14781 532 aaPredicted RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 SYT16Q17RD7 645 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 BTBD16Q32M84 506 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 PYDC2Q56P42 97 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 RBM48Q5RL73 367 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 RBM20Q5T481 1227 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 PXDC1Q5TGL8 231 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 REP15Q6BDI9 236 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 DESI1Q6ICB0 168 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 CYS1Q717R9 158 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 TRMT11Q7Z4G4 463 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 BBS7Q8IWZ6 715 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 LSM14AQ8ND56 463 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 OR2AP1Q8NGE2 309 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ADAMTS16Q8TE57 1224 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 SNAPC3Q92966 411 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 TRMT2BQ96GJ1 504 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 CDKN2AIPNLQ96HQ2 116 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ZNF597Q96LX8 424 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 MUS81Q96NY9 551 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 PSKH2Q96QS6 385 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 C1QTNF7Q9BXJ2 289 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 MFSD1Q9H3U5 465 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 SUV39H2Q9H5I1 410 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 SLA2Q9H6Q3 261 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 ACTR8Q9H981 624 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 MRM3Q9HC36 420 aaKnown RBP5.57□□□□□ -1.52
RFFL-202ENST00000394597 TAS2R9Q9NYW1 312 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 MLXQ9UH92 298 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 FKBPLQ9UIM3 349 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 RIMS3Q9UJD0 308 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 BOLA1Q9Y3E2 137 aa5.57□□□□□ -1.52
RFFL-202ENST00000394597 IFRD1O00458 451 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 SOCS2O14508 198 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 BCAS1O75363 584 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 OR2B3O76000 313 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 PAPSS2O95340 614 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 ZNF682O95780 498 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ANXA5P08758 320 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CCNYL3P0C7X3 344 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TYRP14679 529 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 PFKLP17858 780 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ETV3P41162 512 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SLC1A2P43004 574 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TAS2R39P59534 338 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SIM2Q14190 667 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 MRPL58Q14197 206 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 OXA1LQ15070 435 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 INO80DQ53TQ3 878 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 FAM209AQ5JX71 171 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 FAM131AQ6UXB0 335 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TIFABQ6ZNK6 161 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 LYSMD3Q7Z3D4 306 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 MILR1Q7Z6M3 343 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CACUL1Q86Y37 369 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 MRPL43Q8N983 215 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 OR13C4Q8NGS5 318 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 OLIG1Q8TAK6 271 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 METTL6Q8TCB7 284 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 BPIFB1Q8TDL5 484 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 IRF7Q92985 503 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SLC39A13Q96H72 371 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ACOX2Q99424 681 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 HOPXQ9BPY8 73 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 CHCHD6Q9BRQ6 235 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TTLL2Q9BWV7 592 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 FAM83DQ9H4H8 585 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ZNF556Q9HAH1 456 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 FARSBQ9NSD9 589 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 INTS10Q9NVR2 710 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 RDH8Q9NYR8 311 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 KCNN3Q9UGI6 736 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 PCDHGB4Q9UN71 923 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 WNT6Q9Y6F9 365 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 U3KQV3 271 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 KIAA0100Q14667 2235 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 RBBP6Q7Z6E9 1792 aaKnown RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 A0A0G2JPF8 293 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 C7orf72A4D263 438 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CCDC154A6NI56 674 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SOBPA7XYQ1 873 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 HNRNPCL3B7ZW38 293 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 TK2O00142 265 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 SNAP29O95721 258 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 GNAO1P09471 354 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 HNRNPCL4P0DMR1 293 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ADH5P11766 374 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 DCKP27707 260 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CPOXP36551 454 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 PTGER3P43115 390 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 PIK3CGP48736 1102 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 ELP6Q0PNE2 266 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CAMK2GQ13555 558 aaPredicted RBP5.56□□□□□ -1.52
RFFL-202ENST00000394597 ZNF181Q2M3W8 571 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 RUNDC3AQ59EK9 446 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 LY6G5CQ5SRR4 150 aa5.56□□□□□ -1.52
RFFL-202ENST00000394597 CACHD1Q5VU97 1274 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms