RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ZFAND4Q86XD8 727 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 PPP1R3BQ86XI6 285 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 CEP97Q8IW35 865 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 SMPDL3AQ92484 453 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 MRRFQ96E11 262 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 TCTN2Q96GX1 697 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 HIST1H2AHQ96KK5 128 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 CCDC138Q96M89 665 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 HIST1H2AJQ99878 128 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 H2AFJQ9BTM1 129 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 FUT8Q9BYC5 575 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 TRIM54Q9BYV2 358 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 ACSS3Q9H6R3 686 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 FANCEQ9HB96 536 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 GPAMQ9HCL2 828 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 INTS7Q9NVH2 962 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 ADAMTS6Q9UKP5 1117 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 PDE10AQ9Y233 779 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 PCM1Q15154 2024 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 FREM2Q5SZK8 3169 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 A0A087WV48 116 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 STMND1H3BQB6 276 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 SLC16A8O95907 504 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 STMN1P16949 149 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 FASTKQ14296 549 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 ZNF460Q14592 562 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 EFTUD2Q15029 972 aaKnown RBP eCLIP18.32■□□□□ 0.527e-13■■■□□ 19.1
PDLIM7-204ENST00000393546 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 SYTL1Q8IYJ3 562 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 C19orf47Q8N9M1 422 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 EIF1ADQ8N9N8 165 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 OR8K5Q8NH50 307 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 ZNF480Q8WV37 535 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 ANKRD7Q92527 254 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 DLG3Q92796 817 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 FCRL4Q96PJ5 515 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 CAB39LQ9H9S4 337 aa18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 ANKRD11Q6UB99 2663 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-204ENST00000393546 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 KLK10O43240 276 aa18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 SLU7O95391 586 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 MSL3P1P0C860 447 aa18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 LIPCP11150 499 aa18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 RPA3P35244 121 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 TSTA3Q13630 321 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 GPR19Q15760 415 aa18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 UAP1Q16222 522 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 TRMT10CQ7L0Y3 403 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 FAM20CQ8IXL6 584 aa18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 N4BP2L2Q92802 583 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 ZUFSPQ96AP4 578 aa18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 ZNF501Q96CX3 271 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 CHRNA10Q9GZZ6 450 aa18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 WDR70Q9NW82 654 aa18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 AHCTF1Q8WYP5 2266 aa18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 DMXL2Q8TDJ6 3036 aa18.31■□□□□ 0.52
PDLIM7-204ENST00000393546 A0A087WUV0 522 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 A0A1W2PPV9 198 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 E7ENX8 843 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 STK17BO94768 372 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 ENO2P09104 434 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 FAM153BP0C7A2 387 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 PMS2P54278 862 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 RAB10P61026 200 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 TAP2Q03519 686 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 FAM153CQ494X1 144 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 UBAP2Q5T6F2 1119 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 BROXQ5VW32 411 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 FIGLAQ6QHK4 219 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 SUSD1Q6UWL2 747 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 CDHR3Q6ZTQ4 885 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 OR2A1Q8NGT9 310 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 ANKRD49Q8WVL7 239 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 MIPEPQ99797 713 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 SPRY4Q9C004 299 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 SERTAD3Q9UJW9 196 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 NOVA2Q9UNW9 492 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 TMEM184BQ9Y519 407 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 IKBKGQ9Y6K9 419 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 ANKRD12Q6UB98 2062 aa18.3■□□□□ 0.52
PDLIM7-204ENST00000393546 TARM1B6A8C7 271 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 PHGDHO43175 533 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 INHBAP08476 426 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 MAGP20916 626 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 PSMB5P28074 263 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 IMPA1P29218 277 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 CRABP2P29373 138 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 CMPK1P30085 196 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 ATP1A2P50993 1020 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 AP1S2P56377 157 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 CLN3Q13286 438 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 NAA25Q14CX7 972 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 ZIC1Q15915 447 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 PHKG1Q16816 387 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 KIAA1614Q5VZ46 1190 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 RAPH1Q70E73 1250 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 DTX1Q86Y01 620 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 SPACA3Q8IXA5 215 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 PPFIBP2Q8ND30 876 aa18.29■□□□□ 0.52
PDLIM7-204ENST00000393546 OR2L3Q8NG85 312 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms