RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 COL16A1Q07092 1604 aaPredicted RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 MYO5AQ9Y4I1 1855 aaKnown RBP7.47□□□□□ -1.21
VTI1A-201ENST00000393077 CCL15-CCL14A0A0B4J2E2 113 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 IGKV6D-41A0A0C4DH26 115 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 CLDN24A6NM45 220 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 LINC00587B1AMM8 73 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 ADAM11O75078 769 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 STAU1O95793 577 aaKnown RBP7.46□□□□□ -1.21
VTI1A-201ENST00000393077 RAF1P04049 648 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 RLN2P04090 185 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 BCAT1P54687 386 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 INCA1Q0VD86 236 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 CDK5R2Q13319 367 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 LAPTM5Q13571 262 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 VGLL4Q14135 290 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 PGM5Q15124 567 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 CCL15Q16663 113 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 PARP15Q460N3 678 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 SEZ6Q53EL9 994 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 TIGD3Q6B0B8 471 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 ASB18Q6ZVZ8 466 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 ADGRG3Q86Y34 549 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 SIAH1Q8IUQ4 282 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 SLC22A9Q8IVM8 553 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 GPD1LQ8N335 351 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF565Q8N9K5 539 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 COLGALT1Q8NBJ5 622 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 OR2T12Q8NG77 320 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 C2CD4CQ8TF44 421 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 MOCOSQ96EN8 888 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 QRFPRQ96P65 431 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 BBS4Q96RK4 519 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 TRIM54Q9BYV2 358 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 QRSL1Q9H0R6 528 aaKnown RBP7.46□□□□□ -1.21
VTI1A-201ENST00000393077 CD300AQ9UGN4 299 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 EIF2B4Q9UI10 523 aaKnown RBP7.46□□□□□ -1.21
VTI1A-201ENST00000393077 TLR6Q9Y2C9 796 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 NAALAD2Q9Y3Q0 740 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 SAMHD1Q9Y3Z3 626 aaKnown RBP7.46□□□□□ -1.21
VTI1A-201ENST00000393077 PCDHA2Q9Y5H9 948 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 LTBP4Q8N2S1 1624 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 LINC00862A6NCI5 91 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 M0QZ92 97 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 TLL1O43897 1013 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 SSX4O60224 188 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 HPRP00739 348 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 MBP02144 154 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 NFICP08651 508 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 CBR1P16152 277 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF14P17017 642 aaPredicted RBP7.46□□□□□ -1.21
VTI1A-201ENST00000393077 ITGB5P18084 799 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 AKT1P31749 480 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 GRM5P41594 1212 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 GSTM5P46439 218 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 FNTBP49356 437 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 PER3P56645 1201 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 SP2Q02086 613 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 CUL2Q13617 745 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF273Q14593 569 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 RABL3Q5HYI8 236 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 XAF1Q6GPH4 301 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 C5orf46Q6UWT4 87 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 LRRN1Q6UXK5 716 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 SLC44A2Q8IWA5 706 aaPredicted RBP7.46□□□□□ -1.21
VTI1A-201ENST00000393077 SPATA6LQ8N4H0 392 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 MEIOBQ8N635 442 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 KCT2Q8NC54 265 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 AKR7LQ8NHP1 331 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF606Q8WXB4 792 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 RXFP2Q8WXD0 754 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 KAT2AQ92830 837 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 PTP4A1Q93096 173 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 P2RX7Q99572 595 aaKnown RBP7.46□□□□□ -1.21
VTI1A-201ENST00000393077 SLIRPQ9GZT3 109 aaKnown RBP7.46□□□□□ -1.21
VTI1A-201ENST00000393077 SIK2Q9H0K1 926 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 AP5M1Q9H0R1 490 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 GPATCH2LQ9NWQ4 482 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 UBQLN1Q9UMX0 589 aaKnown RBP7.46□□□□□ -1.21
VTI1A-201ENST00000393077 ENTPD4Q9Y227 616 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 VWA7Q9Y334 891 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 PCDHB5Q9Y5E4 795 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 PCDHGA9Q9Y5G4 932 aaKnown RBP7.46□□□□□ -1.21
VTI1A-201ENST00000393077 FKBP7Q9Y680 259 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 A3GALT2U3KPV4 340 aa7.46□□□□□ -1.21
VTI1A-201ENST00000393077 BAZ2AQ9UIF9 1905 aaKnown RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 LAMB4A4D0S4 1761 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 UBA6A0AVT1 1052 aaPredicted RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 POM121CA8CG34 1229 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 TISP43B9A030 160 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 TEX46H3BTG2 121 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 NME4O00746 187 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 MID1O15344 667 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 ALDOAP04075 364 aaKnown RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 IFNA4P05014 189 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 MIPP30301 263 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 DSG3P32926 999 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 UGT2B10P36537 528 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 HUNKP57058 714 aa7.46□□□□□ -1.22
VTI1A-201ENST00000393077 ADARB1P78563 741 aaKnown RBP7.46□□□□□ -1.22
VTI1A-201ENST00000393077 MC2RQ01718 297 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms