RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CATSPERZQ9NTU4 200 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 OBP2AQ9NY56 170 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 DEC1Q9P2X7 70 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 BOLA1Q9Y3E2 137 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 PABPN1LA6NDY0 278 aaKnown RBP18.54■□□□□ 0.56
CCDC50-202ENST00000392456 WASH3PC4AMC7 463 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 H0YC42 278 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 RNGTTO60942 597 aaKnown RBP18.54■□□□□ 0.56
CCDC50-202ENST00000392456 HLA-EP13747 358 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 CD9P21926 228 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 PSMA3P25788 255 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 TPD52P55327 224 aaPredicted RBP18.54■□□□□ 0.56
CCDC50-202ENST00000392456 MAPRE2Q15555 327 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 LEXMQ3ZCV2 418 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 SDE2Q6IQ49 451 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 ATG14Q6ZNE5 492 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 LINC00299Q6ZSB3 139 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 CLEC14AQ86T13 490 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 LACC1Q8IV20 430 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 KIAA1958Q8N8K9 716 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 HTRA1Q92743 480 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 TFAP2CQ92754 450 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 KLHL32Q96NJ5 620 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 ADNPQ9H2P0 1102 aa18.54■□□□□ 0.56
CCDC50-202ENST00000392456 FBRSL1Q9HCM7 1045 aaKnown RBP18.54■□□□□ 0.56
CCDC50-202ENST00000392456 PRPF19Q9UMS4 504 aaKnown RBP18.54■□□□□ 0.56
CCDC50-202ENST00000392456 LEFTY1O75610 366 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 NTRK1P04629 796 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 XRCC1P18887 633 aaPredicted RBP18.53■□□□□ 0.56
CCDC50-202ENST00000392456 MC4RP32245 332 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 GJA4P35212 333 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 HMGCLP35914 325 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 OPRD1P41143 372 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 ETV1P50549 477 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 CDKN2DP55273 166 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 RUNX3Q13761 415 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 MAPK11Q15759 364 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 ARSIQ5FYB1 569 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 ATAD3CQ5T2N8 411 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 RFLNAQ6ZTI6 216 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 NUDCD3Q8IVD9 361 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 CENPLQ8N0S6 344 aaPredicted RBP18.53■□□□□ 0.56
CCDC50-202ENST00000392456 MSLNLQ96KJ4 702 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 USB1Q9BQ65 265 aaKnown RBP18.53■□□□□ 0.56
CCDC50-202ENST00000392456 C1QTNF1Q9BXJ1 281 aa18.53■□□□□ 0.56
CCDC50-202ENST00000392456 CPEB1Q9BZB8 566 aaKnown RBP18.53■□□□□ 0.56
CCDC50-202ENST00000392456 PLIN3O60664 434 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 CPNE6O95741 557 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 IGFBP4P22692 258 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 HTR2BP41595 481 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 SOX9P48436 509 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 SNX32Q86XE0 403 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 PHTF2Q8N3S3 785 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 ZCCHC7Q8N3Z6 543 aaKnown RBP18.52■□□□□ 0.56
CCDC50-202ENST00000392456 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.52■□□□□ 0.56
CCDC50-202ENST00000392456 BHLHE22Q8NFJ8 381 aaPredicted RBP18.52■□□□□ 0.56
CCDC50-202ENST00000392456 GPR150Q8NGU9 434 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 OR6F1Q8NGZ6 308 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 ZFYVE1Q9HBF4 777 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 DCDC2Q9UHG0 476 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 HCN2Q9UL51 889 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 PI15O43692 258 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 OR1I1O60431 355 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 LHCGRP22888 699 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 GDI1P31150 447 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 METAP1P53582 386 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 TIAL1Q01085 375 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCDC50-202ENST00000392456 NFE2L1Q14494 772 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 PDGFRLQ15198 375 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 CRTC1Q6UUV9 634 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 PIWIL3Q7Z3Z3 882 aaKnown RBP18.52■□□□□ 0.56
CCDC50-202ENST00000392456 PIM3Q86V86 326 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 KCTD4Q8WVF5 259 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 HDAC2Q92769 488 aaKnown RBP18.52■□□□□ 0.56
CCDC50-202ENST00000392456 SERPINI1Q99574 410 aa18.52■□□□□ 0.56
CCDC50-202ENST00000392456 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.52■□□□□ 0.56
CCDC50-202ENST00000392456 KIF26AQ9ULI4 1882 aaPredicted RBP18.52■□□□□ 0.55
CCDC50-202ENST00000392456 COL4A3Q01955 1670 aa18.52■□□□□ 0.55
CCDC50-202ENST00000392456 FAM25AB3EWG3 89 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 FAM25CB3EWG5 89 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 FAM25GB3EWG6 89 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 H3BQ06 376 aaPredicted RBP18.51■□□□□ 0.55
CCDC50-202ENST00000392456 GAPDHSO14556 408 aaPredicted RBP18.51■□□□□ 0.55
CCDC50-202ENST00000392456 GLRA3O75311 464 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 MYF6P23409 242 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 GLRBP48167 497 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 STC1P52823 247 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 RAB10P61026 200 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 ZNF33BQ06732 778 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 SLC13A2Q13183 592 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 MRNIPQ6NTE8 343 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 PRR23BQ6ZRT6 265 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 TP53I13Q8NBR0 393 aaPredicted RBP18.51■□□□□ 0.55
CCDC50-202ENST00000392456 SCRN2Q96FV2 425 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 TRIM15Q9C019 465 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 MAT2BQ9NZL9 334 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 ATG2BQ96BY7 2078 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 VCANP13611 3396 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 OR7A10O76100 309 aa18.51■□□□□ 0.55
CCDC50-202ENST00000392456 OR5F1O95221 314 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms