RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 PPT2Q9UMR5 302 aa20.46■□□□□ 0.87
COL23A1-201ENST00000390654 SMAD6O43541 496 aaKnown RBP20.46■□□□□ 0.87
COL23A1-201ENST00000390654 CPSF4O95639 269 aaKnown RBP20.46■□□□□ 0.87
COL23A1-201ENST00000390654 DDX39BQ13838 428 aaKnown RBP20.46■□□□□ 0.87
COL23A1-201ENST00000390654 USP39Q53GS9 565 aaKnown RBP20.46■□□□□ 0.87
COL23A1-201ENST00000390654 PIK3C3Q8NEB9 887 aa20.46■□□□□ 0.87
COL23A1-201ENST00000390654 WFDC5Q8TCV5 224 aa20.46■□□□□ 0.87
COL23A1-201ENST00000390654 TNKS2Q9H2K2 1166 aa20.46■□□□□ 0.87
COL23A1-201ENST00000390654 ARL15Q9NXU5 204 aa20.46■□□□□ 0.87
COL23A1-201ENST00000390654 GBF1Q92538 1859 aa20.46■□□□□ 0.87
COL23A1-201ENST00000390654 TBL1XO60907 577 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 FAM20BO75063 409 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 JRKO75564 520 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 STC2O76061 302 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 ITIH1P19827 911 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 SEPHS1P49903 392 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 OXA1LQ15070 435 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 CXorf57Q6NSI4 855 aaKnown RBP20.45■□□□□ 0.86
COL23A1-201ENST00000390654 P2RY8Q86VZ1 359 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 HTRA1Q92743 480 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 IL26Q9NPH9 171 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 C5orf42Q9H799 3197 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 IFRD1O00458 451 aaPredicted RBP20.45■□□□□ 0.86
COL23A1-201ENST00000390654 RFXANKO14593 260 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 ACLYP53396 1101 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 FCGRTP55899 365 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 HSPA14Q0VDF9 509 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 PLD1Q13393 1074 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 CHRNA6Q15825 494 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 INAVAQ3KP66 663 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 RGMBQ6NW40 437 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 NCEH1Q6PIU2 408 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 ZNF621Q6ZSS3 439 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 TSPAN33Q86UF1 283 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 CHPFQ8IZ52 775 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 AADATQ8N5Z0 425 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 APIPQ96GX9 242 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 KLHL25Q9H0H3 589 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 SERHLQ9NQF3 203 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 ABCB10Q9NRK6 738 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 KIF17Q9P2E2 1029 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 PCDHGA4Q9Y5G9 962 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 VWA8A3KMH1 1905 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 ITPKAP23677 461 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 VLDLRP98155 873 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 EPS8Q12929 822 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 GBX1Q14549 363 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 TRIM71Q2Q1W2 868 aaKnown RBP20.45■□□□□ 0.86
COL23A1-201ENST00000390654 RFLNAQ6ZTI6 216 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 ZFYVE1Q9HBF4 777 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 USE1Q9NZ43 259 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 ZNF229Q9UJW7 825 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 LRFN2Q9ULH4 789 aa20.45■□□□□ 0.86
COL23A1-201ENST00000390654 ABT1Q9ULW3 272 aaKnown RBP20.45■□□□□ 0.86
COL23A1-201ENST00000390654 TBKBP1A7MCY6 615 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 SLC28A1O00337 649 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 STK16O75716 305 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 CLCA4Q14CN2 919 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 ZBTB2Q8N680 514 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 BCL7CQ8WUZ0 217 aaPredicted RBP20.44■□□□□ 0.86
COL23A1-201ENST00000390654 SH3GL1Q99961 368 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 CPPED1Q9BRF8 314 aaPredicted RBP20.44■□□□□ 0.86
COL23A1-201ENST00000390654 ELOVL6Q9H5J4 265 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 AKIP1Q9NQ31 210 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 ITM2CQ9NQX7 267 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 RNF186Q9NXI6 227 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 MBD1Q9UIS9 605 aaPredicted RBP20.44■□□□□ 0.86
COL23A1-201ENST00000390654 ILVBLA1L0T0 632 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 GAPDHSO14556 408 aaPredicted RBP20.44■□□□□ 0.86
COL23A1-201ENST00000390654 COL6A1P12109 1028 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 CA8P35219 290 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 HMGCLP35914 325 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 GPR17Q13304 367 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 NFATC2Q13469 925 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 ANKS3Q6ZW76 656 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 STK40Q8N2I9 435 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 TTC29Q8NA56 475 aaPredicted RBP20.44■□□□□ 0.86
COL23A1-201ENST00000390654 ELMO1Q92556 727 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 RDH12Q96NR8 316 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 ATG10Q9H0Y0 220 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 PALMDQ9NP74 551 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 SAMHD1Q9Y3Z3 626 aaKnown RBP20.44■□□□□ 0.86
COL23A1-201ENST00000390654 OARD1Q9Y530 152 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 PCDHB7Q9Y5E2 793 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 MYO7AQ13402 2215 aa20.44■□□□□ 0.86
COL23A1-201ENST00000390654 GABARAPL2P60520 117 aa20.43■□□□□ 0.86
COL23A1-201ENST00000390654 SLC22A16Q86VW1 577 aa20.43■□□□□ 0.86
COL23A1-201ENST00000390654 HIPK1Q86Z02 1210 aa20.43■□□□□ 0.86
COL23A1-201ENST00000390654 TMEM132CQ8N3T6 1108 aa20.43■□□□□ 0.86
COL23A1-201ENST00000390654 BBS2Q9BXC9 721 aa20.43■□□□□ 0.86
COL23A1-201ENST00000390654 MARCH5Q9NX47 278 aa20.43■□□□□ 0.86
COL23A1-201ENST00000390654 VPS51Q9UID3 782 aa20.43■□□□□ 0.86
COL23A1-201ENST00000390654 A0A1B0GVM2 712 aa20.43■□□□□ 0.86
COL23A1-201ENST00000390654 DGKAP23743 735 aa20.43■□□□□ 0.86
COL23A1-201ENST00000390654 PDE12Q6L8Q7 609 aaKnown RBP20.43■□□□□ 0.86
COL23A1-201ENST00000390654 MYO19Q96H55 970 aa20.43■□□□□ 0.86
COL23A1-201ENST00000390654 TRIT1Q9H3H1 467 aaKnown RBP20.43■□□□□ 0.86
COL23A1-201ENST00000390654 AASDHPPTQ9NRN7 309 aa20.43■□□□□ 0.86
COL23A1-201ENST00000390654 DNMT3BQ9UBC3 853 aaKnown RBP20.43■□□□□ 0.86
COL23A1-201ENST00000390654 LHX3Q9UBR4 397 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms