RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 PRAMEF33A0A0G2JMD5 474 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 OR52A4PA6NMU1 304 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 E7EQ34 232 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 IFRD1O00458 451 aaPredicted RBP11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 COX4I1P13073 169 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 AK4P27144 223 aaPredicted RBP11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 RASSF2P50749 326 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 NEK2P51955 445 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 KIAA1024LP59773 190 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 TBPL1P62380 186 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 CDC16Q13042 620 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 MTAPQ13126 283 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 CHIT1Q13231 466 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 CLCA4Q14CN2 919 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 UNC5DQ6UXZ4 953 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 SNX32Q86XE0 403 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 SFRP1Q8N474 314 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 FBXO15Q8NCQ5 510 aaPredicted RBP11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 RBM15BQ8NDT2 890 aaKnown RBP11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 OR13H1Q8NG92 308 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 OR56A3Q8NH54 315 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 C12orf66Q96MD2 445 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 WDR92Q96MX6 357 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 TIMM29Q9BSF4 260 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 BTBD10Q9BSF8 475 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 C1orf50Q9BV19 199 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 RMI1Q9H9A7 625 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 CD320Q9NPF0 282 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 NOP53Q9NZM5 478 aaKnown RBP11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 TRPS1Q9UHF7 1281 aa11.83□□□□□ -0.52
SPTBN1-203ENST00000389980 WDFY4Q6ZS81 3184 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 C9JVG2 144 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 MANBAO00462 879 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 LBPP18428 481 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 CD22P20273 847 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 THOP1P52888 689 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 DIO3P55073 304 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 MXRA7P84157 204 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 HMGCS1Q01581 520 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 DMPKQ09013 629 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 CAPRIN2Q6IMN6 1127 aaKnown RBP11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 TTC23LQ6PF05 361 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 GK5Q6ZS86 529 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 EFL1Q7Z2Z2 1120 aaKnown RBP11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 SLC22A18ASQ8N1D0 253 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 RNF175Q8N4F7 328 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 PJA1Q8NG27 643 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 OR5K2Q8NHB8 316 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 SCARF2Q96GP6 870 aaPredicted RBP11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 OR2M4Q96R27 311 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 IMP3Q9NV31 184 aaKnown RBP11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 SCHIP1Q9P0W5 487 aaPredicted RBP11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 THEGQ9P2T0 379 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 ACSL5Q9ULC5 683 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 ZNF490Q9ULM2 529 aaPredicted RBP11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 NCOR1O75376 2440 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 WDR87Q6ZQQ6 2873 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 LRP4O75096 1905 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 KCNE1BA0A087WTH5 132 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 PRR19A6NJB7 356 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 PDZK1P1A8MUH7 402 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 E7ENX8 843 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 GYG2O15488 501 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 ULK1O75385 1050 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 EML2O95834 649 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 HOXC4P09017 264 aaPredicted RBP11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 CCND1P24385 295 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 HTR1BP28222 390 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 CCR3P51677 355 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 SLC25A3Q00325 362 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 IRF8Q02556 426 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 TAP2Q03519 686 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 ZRSR2Q15696 482 aaKnown RBP11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 KIF19Q2TAC6 998 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 XKR6Q5GH73 641 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 C6orf136Q5SQH8 315 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 PAOXQ6QHF9 649 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 HID1Q8IV36 788 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 DCUN1D3Q8IWE4 304 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 LRRC56Q8IYG6 542 aaPredicted RBP11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 RAD51AP1Q96B01 352 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 CMTM5Q96DZ9 223 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 FERD3LQ96RJ6 166 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 NELL2Q99435 816 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 TMEM168Q9H0V1 697 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.82□□□□□ -0.522e-7■■□□□ 13.2
SPTBN1-203ENST00000389980 CCDC167Q9P0B6 97 aa11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.82□□□□□ -0.52
SPTBN1-203ENST00000389980 EML5Q05BV3 1969 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 PRAMEF26H0Y7S4 382 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 GSC2O15499 205 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 AHCYL1O43865 530 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 WFS1O76024 890 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 RASGRP1O95267 797 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 APBB3O95704 486 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 PDYNP01213 254 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 PRR35P0CG20 571 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 IDSP22304 550 aa11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 VARSP26640 1264 aaKnown RBP11.81□□□□□ -0.52
SPTBN1-203ENST00000389980 OXTRP30559 389 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms