RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ZFAND4Q86XD8 727 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 RHEBL1Q8TAI7 183 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 CHPT1Q8WUD6 406 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 BTN2A2Q8WVV5 523 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 L3HYPDHQ96EM0 354 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 SLC30A2Q9BRI3 323 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 TMEM246Q9BRR3 403 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 MAGEH1Q9H213 219 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 WDR6Q9NNW5 1121 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 TLR6Q9Y2C9 796 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 PCDHGA10Q9Y5H3 936 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 TPST2O60704 377 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 CELF2O95319 508 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 MATN4O95460 622 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 HPRP00739 348 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 IFNW1P05000 195 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 ALPIP09923 528 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 NR2F1P10589 423 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 RPP38P78345 283 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 GHRHRQ02643 423 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 GALNT1Q10472 559 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 PON2Q15165 354 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 KCNJ8Q15842 424 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 IFI44LQ53G44 452 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 KANK2Q63ZY3 851 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 CDC73Q6P1J9 531 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 HDDC2Q7Z4H3 204 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 TRAPPC5Q8IUR0 188 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 HJURPQ8NCD3 748 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 CLP1Q92989 425 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 SLC38A4Q969I6 547 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 TMEM169Q96HH4 297 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 TTYH2Q9BSA4 534 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 ERVK13-1Q9NX77 482 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 ABT1Q9ULW3 272 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 ADAMTS7Q9UKP4 1686 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 ACSL4O60488 711 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 GADD45GO95257 159 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 CRHBPP24387 322 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 CORO1AP31146 461 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 ABRAXAS2Q15018 415 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 TBRG1Q3YBR2 411 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 IQCCQ4KMZ1 466 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 GCNT6Q5T4J0 391 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 DUS1LQ6P1R4 473 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 CYP4V2Q6ZWL3 525 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 CYP2U1Q7Z449 544 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 FGD2Q7Z6J4 655 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 TMPRSS11BQ86T26 416 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 PSD4Q8NDX1 1056 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 ATL1Q8WXF7 558 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 FNDC11Q9BVV2 318 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 SMOC2Q9H3U7 446 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 TMLHEQ9NVH6 421 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 KLHL28Q9NXS3 571 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 MRPL39Q9NYK5 338 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 MKLN1Q9UL63 735 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 DOCK2Q92608 1830 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 NOS1APO75052 506 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 CCNB2O95067 398 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 HOXA11P31270 313 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 POLR2IP36954 125 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 MAPKAPK2P49137 400 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 ANXA11P50995 505 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 SNAPC1Q16533 368 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 C5orf22Q49AR2 442 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 DDX60LQ5H9U9 1706 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 LCN1P1Q5VSP4 162 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 ASCC1Q8N9N2 400 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 OR8J3Q8NGG0 315 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 UROC1Q96N76 676 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 DUSP26Q9BV47 211 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 NECTIN3Q9NQS3 549 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 PCDHGA11Q9Y5H2 935 aa12.84□□□□□ -0.35
TRAPPC9-201ENST00000389328 PRRC2BQ5JSZ5 2229 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 PRR23AA6NEV1 266 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 UPK3BL1B0FP48 263 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 UPK3BL2E5RIL1 263 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 SGTAO43765 313 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 TUFMP49411 452 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 RORCP51449 518 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 ABATP80404 500 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 CRTC2Q53ET0 693 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 LAPTM4BQ86VI4 370 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 ZNF671Q8TAW3 534 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 BBS4Q96RK4 519 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 ZNF382Q96SR6 550 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 BARD1Q99728 777 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 ENPP5Q9UJA9 477 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 FZD4Q9ULV1 537 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 CLCA2Q9UQC9 943 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 ANXA8P13928 327 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 GGT1P19440 569 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 C4BPBP20851 252 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 DCTP40126 519 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 SRSF11Q05519 484 aaKnown RBP12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 CDK5R2Q13319 367 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 SMU1Q2TAY7 513 aa12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 C18orf21Q32NC0 220 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC9-201ENST00000389328 MS4A13Q5J8X5 152 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms