RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 PCTPQ9UKL6 214 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 ARHGAP10A1A4S6 786 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 NPIPB15A6NHN6 443 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-202ENST00000379996 E2F3O00716 465 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 STX16O14662 325 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 SRP72O76094 671 aaKnown RBP7.54□□□□□ -1.2
CDKL5-202ENST00000379996 GNAO1P09471 354 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 TDGF1P13385 188 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 HLA-EP13747 358 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 HOXB9P17482 250 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-202ENST00000379996 TCN1P20061 433 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-202ENST00000379996 CDK9P50750 372 aaKnown RBP7.54□□□□□ -1.2
CDKL5-202ENST00000379996 ATXN3P54252 364 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-202ENST00000379996 KIAA1211LQ6NV74 962 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 AFTPHQ6ULP2 937 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 ISLR2Q6UXK2 745 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 KDELC2Q7Z4H8 507 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 PDPRQ8NCN5 879 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 EID2BQ96D98 161 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 TCF12Q99081 682 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 SEMA6AQ9H2E6 1030 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 LMAN1LQ9HAT1 526 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 ZFYVE1Q9HBF4 777 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 CD320Q9NPF0 282 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 PCDH12Q9NPG4 1184 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 ZDHHC4Q9NPG8 344 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 CA14Q9ULX7 337 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 GAPDHSO14556 408 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 CLGNO14967 610 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 RASAL1O95294 804 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 HOXC4P09017 264 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 C1SP09871 688 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 GFAPP14136 432 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 TSPAN8P19075 237 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 LHCGRP22888 699 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 SLC19A1P41440 591 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 NRF1Q16656 503 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 PRMT9Q6P2P2 845 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 KLC3Q6P597 504 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 BTLAQ7Z6A9 289 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 FAM169BQ8N8A8 192 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 PTGR2Q8N8N7 351 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 LRRC58Q96CX6 371 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 RMDN1Q96DB5 314 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 MPP4Q96JB8 637 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 MRGPRX1Q96LB2 322 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 CDK15Q96Q40 435 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 TRIM54Q9BYV2 358 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 PNPLA3Q9NST1 481 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 ATXN10Q9UBB4 475 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 MUTYHQ9UIF7 546 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 H3BSA7 217 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 ZNF701M0R085 212 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 AZIN1O14977 448 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 GABRG2P18507 467 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 CHRM3P20309 590 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 PRDX3P30048 256 aaKnown RBP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 GKP32189 559 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 TAS2R38P59533 333 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 ADARB1P78563 741 aaKnown RBP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 BNIP2Q12982 314 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 ADRM1Q16186 407 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 GPR33Q49SQ1 333 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 PDCD4Q53EL6 469 aaKnown RBP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 AP1ARQ63HQ0 302 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 SYVN1Q86TM6 617 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 RYBPQ8N488 228 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 DPP10Q8N608 796 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 CELF2-AS1Q8N7Q2 184 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 DRAXINQ8NBI3 349 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 DENND6BQ8NEG7 585 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 RHBDD1Q8TEB9 315 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 ULK4Q96C45 1275 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 NMD3Q96D46 503 aaKnown RBP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 DTNBP1Q96EV8 351 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 CIB1Q99828 191 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 P2RY12Q9H244 342 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 NOL11Q9H8H0 719 aaKnown RBP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 NTN4Q9HB63 628 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 VCX3AQ9NNX9 186 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 ADA2Q9NZK5 511 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 PKD2L2Q9NZM6 624 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 B4GALT6Q9UBX8 382 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 FBXL21Q9UKT6 434 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 TMCO1Q9UM00 188 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 NDUFAF1Q9Y375 327 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 COMMD10Q9Y6G5 202 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 BRWD1Q9NSI6 2320 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 IGLV3-16A0A075B6K0 115 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 ATP6AP2A0A1C7CYW4 349 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 FAM170BA6NMN3 283 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 ZNF839A8K0R7 811 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 ARPC2O15144 300 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 ZNF217O75362 1048 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 TIPRLO75663 272 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 ATP6AP2O75787 350 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 RPS3P23396 243 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDKL5-202ENST00000379996 SPINT3P49223 89 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 HPCAP84074 193 aa7.53□□□□□ -1.2
CDKL5-202ENST00000379996 LCP2Q13094 533 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms