RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 GPR153Q6NV75 609 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 SMARCD3Q6STE5 483 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 BPIFB1Q8TDL5 484 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 SMPDL3AQ92484 453 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 RGMAQ96B86 450 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 CRTAC1Q9NQ79 661 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 TVP23BQ9NYZ1 205 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 MOCS1Q9NZB8 636 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 INSL5Q9Y5Q6 135 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 MAGP20916 626 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 CLCN4P51793 760 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 LRRC58Q96CX6 371 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 OR52B2Q96RD2 323 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 OR51V1Q9H2C8 321 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 CTPS2Q9NRF8 586 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 ETAA1Q9NY74 926 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 ZIM2Q9NZV7 527 aa17.4■□□□□ 0.38
CNTNAP3-204ENST00000377656 EDDM13A0A1B0GTR0 161 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 PIRO00625 290 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 CBSLP0DN79 551 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 CBSP35520 551 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 CLCN7P51798 805 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 SPIN4Q56A73 249 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 RBM20Q5T481 1227 aaKnown RBP17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 OXR1Q8N573 874 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 TP53INP1Q96A56 240 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 CGREF1Q99674 301 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 CLDND1Q9NY35 253 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 FLRT1Q9NZU1 646 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 WNT6Q9Y6F9 365 aa17.39■□□□□ 0.38
CNTNAP3-204ENST00000377656 CDC7O00311 574 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 KDELR3O43731 214 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 SRPRAP08240 638 aaKnown RBP17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 FAM182AQ5T1J6 154 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 PDPRQ8NCN5 879 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 COPS4Q9BT78 406 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 TIMMDC1Q9NPL8 285 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 KDM3BQ7LBC6 1761 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 CHD2O14647 1828 aaKnown RBP17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 NR4A1P22736 598 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 PIK3CBP42338 1070 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 DGKEP52429 567 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 OLFML2AQ68BL7 652 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 ZCCHC12Q6PEW1 402 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 PIM3Q86V86 326 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 C1orf52Q8N6N3 182 aaKnown RBP17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 TMEM145Q8NBT3 493 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 KCT2Q8NC54 265 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 PJA1Q8NG27 643 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 COL21A1Q96P44 957 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 IFT27Q9BW83 186 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 SLC29A3Q9BZD2 475 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 HCN3Q9P1Z3 774 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 KLF11O14901 512 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 TLX3O43711 291 aaPredicted RBP17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 NOBOXO60393 691 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 PRAMEF12O95522 483 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 ZNF8P17098 575 aaPredicted RBP17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 DNAJB1P25685 340 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 SCARB2Q14108 478 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 TMEM44Q2T9K0 475 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 MSS51Q4VC12 460 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 UBAP2Q5T6F2 1119 aaKnown RBP17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 CTU1Q7Z7A3 348 aaKnown RBP17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 PQLC3Q8N755 202 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 TRIM2Q9C040 744 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 TMEM248Q9NWD8 314 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 SNX7Q9UNH6 387 aa17.39■□□□□ 0.37
CNTNAP3-204ENST00000377656 ERI3O43414 337 aaKnown RBP17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 AOC2O75106 756 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 MTHFD1P11586 935 aaKnown RBP17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 CCL5P13501 91 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 STC1P52823 247 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 RPL26P61254 145 aaKnown RBP17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 TFGQ92734 400 aaPredicted RBP17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 ASB9Q96DX5 294 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 ITGB1BP2Q9UKP3 347 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 PPM1HQ9ULR3 514 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 SAGE2PA6NJ88 616 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 FAM25EA8MYX2 175 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 EI24O14681 340 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 PRAMEF11O60813 436 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 CNTN5O94779 1100 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 F7P08709 466 aaPredicted RBP17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 GNSP15586 552 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 KCNA5P22460 613 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 CCKBRP32239 447 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 C5orf22Q49AR2 442 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 CMTM7Q96FZ5 175 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 LCHNA4D1U4 455 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 EPOP01588 193 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 TYRP14679 529 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 DNASE1L1P49184 302 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 SEPHS1P49903 392 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 C22orf39Q6P5X5 142 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 C6orf89Q6UWU4 347 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 NUP54Q7Z3B4 507 aa17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 KAT8Q9H7Z6 458 aaKnown RBP17.38■□□□□ 0.37
CNTNAP3-204ENST00000377656 SMURF2Q9HAU4 748 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms