RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 LNPEPQ9UIQ6 1025 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 COL27A1Q8IZC6 1860 aaPredicted RBP20.61■□□□□ 0.89
CBWD3-202ENST00000377342 UNC13CQ8NB66 2214 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 HEATR5BQ9P2D3 2071 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 CEP250Q9BV73 2442 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 FAM221BA6H8Z2 402 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 KDM1AO60341 852 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 RPS17P08708 135 aaKnown RBP20.61■□□□□ 0.89
CBWD3-202ENST00000377342 EEF1DP29692 281 aaKnown RBP20.61■□□□□ 0.89
CBWD3-202ENST00000377342 HSD17B2P37059 387 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 NAE1Q13564 534 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 PCBP2Q15366 365 aaKnown RBP eCLIP20.61■□□□□ 0.89
CBWD3-202ENST00000377342 HHATQ5VTY9 493 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 CES4AQ5XG92 561 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 SUSD1Q6UWL2 747 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 SLC22A9Q8IVM8 553 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 RHBDD1Q8TEB9 315 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 L3HYPDHQ96EM0 354 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 CNDP2Q96KP4 475 aaKnown RBP20.61■□□□□ 0.89
CBWD3-202ENST00000377342 SGPP1Q9BX95 441 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 C1QTNF3Q9BXJ4 246 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 PITPNM3Q9BZ71 974 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 SPHK1Q9NYA1 384 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 OR6C2Q9NZP2 312 aa20.61■□□□□ 0.89
CBWD3-202ENST00000377342 WDR91A4D1P6 747 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 CHRM5P08912 532 aaPredicted RBP20.6■□□□□ 0.89
CBWD3-202ENST00000377342 FGF3P11487 239 aaPredicted RBP20.6■□□□□ 0.89
CBWD3-202ENST00000377342 PSMB5P28074 263 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 EPHA4P54764 986 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 DNAJB13P59910 316 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 HERVK_113P63132 956 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 ZNF678Q5SXM1 525 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 LIPMQ5VYY2 423 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 RPS27LQ71UM5 84 aaKnown RBP20.6■□□□□ 0.89
CBWD3-202ENST00000377342 EFL1Q7Z2Z2 1120 aaKnown RBP20.6■□□□□ 0.89
CBWD3-202ENST00000377342 SPRED1Q7Z699 444 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 RAB42Q8N4Z0 105 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 FLVCR1-AS1Q8TAF5 88 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 CCDC126Q96EE4 140 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 MED8Q96G25 268 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 OR4K3Q96R72 315 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 PAIP2Q9BPZ3 127 aaKnown RBP20.6■□□□□ 0.89
CBWD3-202ENST00000377342 ERVK-6Q9BXR3 956 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 CD244Q9BZW8 370 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 INTS7Q9NVH2 962 aaKnown RBP20.6■□□□□ 0.89
CBWD3-202ENST00000377342 FTSJ1Q9UET6 329 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 PCTPQ9UKL6 214 aa20.6■□□□□ 0.89
CBWD3-202ENST00000377342 CPED1A4D0V7 1026 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 OR6C74A6NCV1 312 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 E2F3O00716 465 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 BIRC5O15392 142 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 PRICKLE3O43900 615 aaPredicted RBP20.59■□□□□ 0.89
CBWD3-202ENST00000377342 PNLIPP16233 465 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 TYRP1P17643 537 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 GPR3P46089 330 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 CAPZBP47756 277 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 OR1D5P58170 312 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 PPP1CAP62136 330 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 DAB2P98082 770 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 UNC50Q53HI1 259 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 OR6C4Q8NGE1 309 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 OR6Y1Q8NGX8 325 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 OR10G6Q8NH81 332 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 NSUN5Q96P11 429 aaKnown RBP20.59■□□□□ 0.89
CBWD3-202ENST00000377342 CCDC177Q9NQR7 707 aaPredicted RBP20.59■□□□□ 0.89
CBWD3-202ENST00000377342 KCNK4Q9NYG8 393 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 SH2B3Q9UQQ2 575 aa20.59■□□□□ 0.89
CBWD3-202ENST00000377342 IGHV1OR21-1A0A087WYE8 117 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.58■□□□□ 0.89
CBWD3-202ENST00000377342 OR5K3A6NET4 321 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 B4GAT1O43505 415 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 STK16O75716 305 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 UBXN7O94888 489 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 LDOC1O95751 146 aaPredicted RBP20.58■□□□□ 0.89
CBWD3-202ENST00000377342 EPORP19235 508 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 IMPDH1P20839 514 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 ZCCHC23Q6ZST2 131 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 LRRC70Q7Z2Q7 622 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 PIP4P1Q86T03 277 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 SMPDL3AQ92484 453 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 NAT6Q93015 286 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 SLC22A14Q9Y267 594 aa20.58■□□□□ 0.89
CBWD3-202ENST00000377342 PCNX2A6NKB5 2137 aa20.58■□□□□ 0.88
CBWD3-202ENST00000377342 ZNF839A8K0R7 811 aa20.58■□□□□ 0.88
CBWD3-202ENST00000377342 TRIM13O60858 407 aa20.58■□□□□ 0.88
CBWD3-202ENST00000377342 WDR47O94967 919 aa20.58■□□□□ 0.88
CBWD3-202ENST00000377342 ALDH4A1P30038 563 aa20.58■□□□□ 0.88
CBWD3-202ENST00000377342 LIMK1P53667 647 aa20.58■□□□□ 0.88
CBWD3-202ENST00000377342 YBX1P67809 324 aaKnown RBP20.58■□□□□ 0.88
CBWD3-202ENST00000377342 ARFGAP2Q8N6H7 521 aa20.58■□□□□ 0.88
CBWD3-202ENST00000377342 FAM76AQ8TAV0 307 aa20.58■□□□□ 0.88
CBWD3-202ENST00000377342 IFI44Q8TCB0 444 aa20.58■□□□□ 0.88
CBWD3-202ENST00000377342 ZNF483Q8TF39 744 aaPredicted RBP20.58■□□□□ 0.88
CBWD3-202ENST00000377342 GATA5Q9BWX5 397 aaPredicted RBP20.58■□□□□ 0.88
CBWD3-202ENST00000377342 GSTO2Q9H4Y5 243 aa20.58■□□□□ 0.88
CBWD3-202ENST00000377342 INTS9Q9NV88 658 aaKnown RBP20.58■□□□□ 0.88
CBWD3-202ENST00000377342 TNPO3Q9Y5L0 923 aaKnown RBP20.58■□□□□ 0.88
CBWD3-202ENST00000377342 K7EPI3 171 aa20.57■□□□□ 0.88
CBWD3-202ENST00000377342 CCNT2O60583 730 aaKnown RBP20.57■□□□□ 0.88
CBWD3-202ENST00000377342 GFRA3O60609 400 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms