RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 YIPF4Q9BSR8 244 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 MYLK2Q9H1R3 596 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 ATXN10Q9UBB4 475 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 LHX3Q9UBR4 397 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 EGFL7Q9UHF1 273 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 CDC14AQ9UNH5 594 aa8.25□□□□□ -1.09
CRNKL1-202ENST00000377340 OR5K4A6NMS3 321 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 SNX3O60493 162 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 OR6A2O95222 327 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 UROSP10746 265 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 CDH2P19022 906 aaPredicted RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 VARSP26640 1264 aaKnown RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 SHMT2P34897 504 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 GCKP35557 465 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 RPL3P39023 403 aaKnown RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 ESRRGP62508 458 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 ZNF155Q12901 538 aaPredicted RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 GPNMBQ14956 572 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 VPS26BQ4G0F5 336 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 DEFB134Q4QY38 66 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 TMEM135Q86UB9 458 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 CYP4Z1Q86W10 505 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 CDK20Q8IZL9 346 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 DCAKDQ8WVC6 231 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 ZNF707Q96C28 371 aaPredicted RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 PRR11Q96HE9 360 aaPredicted RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 PLA2G2FQ9BZM2 168 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 LEF1Q9UJU2 399 aaPredicted RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 KERAO60938 352 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 TFPIP10646 304 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 IDO1P14902 403 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 HSD17B2P37059 387 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 CDK3Q00526 305 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 SIX1Q15475 284 aaPredicted RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 HKDC1Q2TB90 917 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 FRG2Q64ET8 278 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 GK5Q6ZS86 529 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 LIX1Q8N485 282 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 TMIEQ8NEW7 156 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 OR5M3Q8NGP4 307 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 OR5AR1Q8NGP9 310 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 B4GALNT2Q8NHY0 566 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 NT5C3BQ969T7 300 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 KIAA1143Q96AT1 154 aaPredicted RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 DTD2Q96FN9 168 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 FRG2BQ96QU4 278 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 NPAS2Q99743 824 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 GAREM1Q9H706 876 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 PDE7BQ9NP56 450 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 OBP2AQ9NY56 170 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 RNF11Q9Y3C5 154 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 PEX12O00623 359 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 FANCGO15287 622 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 AP2A2O94973 939 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 ARHGEF15O94989 841 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 CLK3P49761 638 aaKnown RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 SUOXP51687 545 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 BIKQ13323 160 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 TMEM198Q66K66 360 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 PNCKQ6P2M8 343 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 KDELC1Q6UW63 502 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 CD300LGQ6UXG3 332 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 TTLL10Q6ZVT0 673 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 P3H2Q8IVL5 708 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 PGBD5Q8N414 524 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 BANPQ8N9N5 519 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 UTP15Q8TED0 518 aaKnown RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 THAP3Q8WTV1 239 aaPredicted RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 KCNA7Q96RP8 456 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 TMEM168Q9H0V1 697 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 C6orf106Q9H6K1 298 aaPredicted RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 C1orf109Q9NX04 203 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 MAT2BQ9NZL9 334 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 SNX5Q9Y5X3 404 aa8.24□□□□□ -1.09
CRNKL1-202ENST00000377340 LRRC14BA6NHZ5 514 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 WASH4PA8MWX3 477 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 C2orf74A8MZ97 194 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 H3BN98 237 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 PCDH7O60245 1069 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 REM1O75628 298 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 OR2B3O76000 313 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 HNMTP50135 292 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 CDKN2DP55273 166 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 TBCELQ5QJ74 424 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 AP1ARQ63HQ0 302 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 ICE2Q659A1 982 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 OR4F6Q8NGB9 312 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 SLC5A11Q8WWX8 675 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 SMPDL3BQ92485 455 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 SLC6A18Q96N87 628 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 ADPRHL2Q9NX46 363 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 VPS29Q9UBQ0 182 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 COPS7AQ9UBW8 275 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 MKL2Q9ULH7 1088 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 HOXC11O43248 304 aaPredicted RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 EDF1O60869 148 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 SLC16A8O95907 504 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 NDUFV2P19404 249 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 CCR10P46092 362 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms