RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 TAF1AQ15573 450 aaPredicted RBP16.11■□□□□ 0.17
TRIM39-201ENST00000376656 PROX2Q3B8N5 592 aa16.11■□□□□ 0.17
TRIM39-201ENST00000376656 ENTHD1Q8IYW4 607 aa16.11■□□□□ 0.17
TRIM39-201ENST00000376656 ATG16L2Q8NAA4 619 aa16.11■□□□□ 0.17
TRIM39-201ENST00000376656 COPS4Q9BT78 406 aa16.11■□□□□ 0.17
TRIM39-201ENST00000376656 AMBNQ9NP70 447 aa16.11■□□□□ 0.17
TRIM39-201ENST00000376656 IL1RAPQ9NPH3 570 aa16.11■□□□□ 0.17
TRIM39-201ENST00000376656 FBXL12Q9NXK8 326 aa16.11■□□□□ 0.17
TRIM39-201ENST00000376656 TNPO3Q9Y5L0 923 aaKnown RBP16.11■□□□□ 0.17
TRIM39-201ENST00000376656 HOXC11O43248 304 aaPredicted RBP16.1■□□□□ 0.17
TRIM39-201ENST00000376656 MRPS14O60783 128 aaKnown RBP16.1■□□□□ 0.17
TRIM39-201ENST00000376656 CXCR2P25025 360 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 DNAJA1P31689 397 aaKnown RBP16.1■□□□□ 0.17
TRIM39-201ENST00000376656 GNPDA1P46926 289 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 VLDLRP98155 873 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 ZNF45Q02386 682 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 TIGD6Q17RP2 521 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 PARP15Q460N3 678 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 AGAP6Q5VW22 663 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 SLX4IPQ5VYV7 408 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 Q6ZPB1 254 aaPredicted RBP16.1■□□□□ 0.17
TRIM39-201ENST00000376656 VTCN1Q7Z7D3 282 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 RGL4Q8IZJ4 473 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 CHAC2Q8WUX2 184 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 AGAP4Q96P64 663 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 REXO4Q9GZR2 422 aaKnown RBP16.1■□□□□ 0.17
TRIM39-201ENST00000376656 ABHD16BQ9H3Z7 469 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 LRTM1Q9HBL6 345 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 ST3GAL5Q9UNP4 418 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 NUP214P35658 2090 aaPredicted RBP16.1■□□□□ 0.17
TRIM39-201ENST00000376656 A0A0D9SEW6 157 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 TAPBPO15533 448 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 FFAR2O15552 330 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 FPR1P21462 350 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 S100A5P33763 92 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 CLCN7P51798 805 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 TSPY1Q01534 308 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 PRKCDQ05655 676 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 ZNF467Q7Z7K2 595 aaPredicted RBP16.1■□□□□ 0.17
TRIM39-201ENST00000376656 AMER2Q8N7J2 671 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 KCNJ9Q92806 393 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 TBC1D20Q96BZ9 403 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 MTFMTQ96DP5 389 aaKnown RBP16.1■□□□□ 0.17
TRIM39-201ENST00000376656 NXF2Q9GZY0 626 aaKnown RBP16.1■□□□□ 0.17
TRIM39-201ENST00000376656 PDFQ9HBH1 243 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 ZNF490Q9ULM2 529 aaPredicted RBP16.1■□□□□ 0.17
TRIM39-201ENST00000376656 SAMHD1Q9Y3Z3 626 aaKnown RBP16.1■□□□□ 0.17
TRIM39-201ENST00000376656 PCDHGA3Q9Y5H0 932 aa16.1■□□□□ 0.17
TRIM39-201ENST00000376656 C2orf81A6NN90 581 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 VIPP01282 170 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 TTPAP49638 278 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 MAD2L1Q13257 205 aaPredicted RBP16.09■□□□□ 0.17
TRIM39-201ENST00000376656 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.09■□□□□ 0.17
TRIM39-201ENST00000376656 TINF2Q9BSI4 451 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 OR51E2Q9H255 320 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 ZNF408Q9H9D4 720 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 SNX6Q9UNH7 406 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 SAMD4AQ9UPU9 718 aaKnown RBP16.09■□□□□ 0.17
TRIM39-201ENST00000376656 AP3M1Q9Y2T2 418 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 PCDHGB6Q9Y5F9 930 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 MN1Q10571 1320 aaPredicted RBP16.09■□□□□ 0.17
TRIM39-201ENST00000376656 TLR5O60602 858 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 ERN1O75460 977 aaKnown RBP16.09■□□□□ 0.17
TRIM39-201ENST00000376656 BCKDHAP12694 445 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 SLC19A1P41440 591 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 DDR2Q16832 855 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 USP39Q53GS9 565 aaKnown RBP16.09■□□□□ 0.17
TRIM39-201ENST00000376656 HORMAD1Q86X24 394 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 KLHDC9Q8NEP7 349 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 KCNH6Q9H252 994 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 ABI2Q9NYB9 513 aaPredicted RBP16.09■□□□□ 0.17
TRIM39-201ENST00000376656 MFN2O95140 757 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 PRLP01236 227 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 PTPN6P29350 595 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 NPRL3Q12980 569 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 ATAD3CQ5T2N8 411 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 LRIF1Q5T3J3 769 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 DOK6Q6PKX4 331 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 TMEM132CQ8N3T6 1108 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 EFHBQ8N7U6 833 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 LPCAT1Q8NF37 534 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 OR6F1Q8NGZ6 308 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 CDCA5Q96FF9 252 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 Q96MT0 163 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 CDK5RAP1Q96SZ6 601 aaKnown RBP16.09■□□□□ 0.17
TRIM39-201ENST00000376656 TRMT13Q9NUP7 481 aaKnown RBP16.09■□□□□ 0.17
TRIM39-201ENST00000376656 ZNF221Q9UK13 617 aa16.09■□□□□ 0.17
TRIM39-201ENST00000376656 SLC28A1O00337 649 aa16.08■□□□□ 0.17
TRIM39-201ENST00000376656 ABHD18Q0P651 414 aa16.08■□□□□ 0.17
TRIM39-201ENST00000376656 SLC46A3Q7Z3Q1 461 aa16.08■□□□□ 0.17
TRIM39-201ENST00000376656 MON1AQ86VX9 555 aa16.08■□□□□ 0.17
TRIM39-201ENST00000376656 CFAP52Q8N1V2 620 aa16.08■□□□□ 0.17
TRIM39-201ENST00000376656 OR2B2Q9GZK3 357 aa16.08■□□□□ 0.17
TRIM39-201ENST00000376656 GPRC5BQ9NZH0 403 aa16.08■□□□□ 0.17
TRIM39-201ENST00000376656 EHD3Q9NZN3 535 aa16.08■□□□□ 0.17
TRIM39-201ENST00000376656 TBC1D14Q9P2M4 693 aa16.08■□□□□ 0.17
TRIM39-201ENST00000376656 VPS9D1Q9Y2B5 631 aa16.08■□□□□ 0.17
TRIM39-201ENST00000376656 DLGAP4Q9Y2H0 992 aa16.08■□□□□ 0.17
TRIM39-201ENST00000376656 AP3D1O14617 1153 aa16.08■□□□□ 0.16
TRIM39-201ENST00000376656 WNT9AO14904 365 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms