RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 RACGAP1Q9H0H5 632 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 RGPD1P0DJD0 1748 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CHURC1-FNTBB4DL54 471 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 H0YAE9 185 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 H0YJX3 145 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 PI15O43692 258 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 KCNQ1P51787 676 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CLCN4P51793 760 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 PCDH1Q08174 1060 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 LARS2Q15031 903 aaKnown RBP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 PIGGQ5H8A4 983 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 SLC22A16Q86VW1 577 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CEP97Q8IW35 865 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 KCNJ9Q92806 393 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 RERGQ96A58 199 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 PDCD10Q9BUL8 212 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 SLC29A3Q9BZD2 475 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CCSER2Q9H7U1 834 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CTPS2Q9NRF8 586 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 TBC1D14Q9P2M4 693 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 MBD2Q9UBB5 411 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 SLC22A14Q9Y267 594 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 GRB7Q14451 532 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF423Q2M1K9 1284 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 FBXO43Q4G163 708 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 PRSS55Q6UWB4 352 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF433Q8N7K0 673 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 PHC3Q8NDX5 983 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 HDAC2Q92769 488 aaKnown RBP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 HAPLN2Q9GZV7 340 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 TAS2R7Q9NYW3 318 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CCDC59Q9P031 241 aaKnown RBP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 ABHD14A-ACY1A0A1B0GW23 586 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 FAM47E-STBD1D6RA91 191 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CXCL14O95715 111 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 TFPTP0C1Z6 253 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 ELNP15502 786 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 ELK4P28324 431 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 HNMTP50135 292 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 TMBIM6P55061 237 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CREB5Q02930 508 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 SCARB2Q14108 478 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 KLHL22Q53GT1 634 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 MS4A13Q5J8X5 152 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 NIPAL1Q6NVV3 410 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 DLK2Q6UY11 383 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 CEP295NLQ96MC4 621 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 NSUN5Q96P11 429 aaKnown RBP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 HEPHQ9BQS7 1158 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 KCNN2Q9H2S1 579 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 ZDHHC3Q9NYG2 299 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 MALT1Q9UDY8 824 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 NENFQ9UMX5 172 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 POFUT2Q9Y2G5 429 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 PCDHGA10Q9Y5H3 936 aa11.28□□□□□ -0.6
PTCH1-203ENST00000375274 SPIN1Q9Y657 262 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-203ENST00000375274 PRORSD1PA6NEY8 169 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 M0QX08 132 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 GLUD1P00367 558 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 C7P10643 843 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 CTSEP14091 401 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 AGTR2P50052 363 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 LAPTM4AQ15012 233 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 CHRNA6Q15825 494 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 ATP6AP1Q15904 470 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 CHST9Q7L1S5 443 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 KRT77Q7Z794 578 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 PIGXQ8TBF5 258 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 WRAP53Q9BUR4 548 aaKnown RBP11.27□□□□□ -0.6
PTCH1-203ENST00000375274 RSPH9Q9H1X1 276 aaPredicted RBP11.27□□□□□ -0.6
PTCH1-203ENST00000375274 THUMPD1Q9NXG2 353 aaKnown RBP11.27□□□□□ -0.6
PTCH1-203ENST00000375274 PRKAB1Q9Y478 270 aa11.27□□□□□ -0.6
PTCH1-203ENST00000375274 A0A0U1RQF3 1178 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 KLHL33A6NCF5 533 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 RLN1P04808 185 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 GM2AP17900 193 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 CSTF2P33240 577 aaKnown RBP eCLIP11.27□□□□□ -0.61
PTCH1-203ENST00000375274 CLCN2P51788 898 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 LRRC73Q5JTD7 316 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 C6orf141Q5SZD1 244 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 CES5AQ6NT32 575 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 RTL4Q6ZR62 310 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 BEND5Q7L4P6 421 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 DBF4BQ8NFT6 615 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 C2orf15Q8WU43 125 aaKnown RBP11.27□□□□□ -0.61
PTCH1-203ENST00000375274 NRG4Q8WWG1 115 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 ZBED6CLQ96FA7 236 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-203ENST00000375274 MEAF6Q9HAF1 191 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 TPT1P8Q9HAU6 139 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 DEC1Q9P2X7 70 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 CSKP41240 450 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 CRB2Q5IJ48 1285 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 FAM91A1Q658Y4 838 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 MINDY1Q8N5J2 469 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 C1orf52Q8N6N3 182 aaKnown RBP11.27□□□□□ -0.61
PTCH1-203ENST00000375274 RHEBL1Q8TAI7 183 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 FNDC8Q8TC99 324 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 UFD1Q92890 307 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 CRELD1Q96HD1 420 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 LRCH3Q96II8 777 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms