RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TTPAP49638 278 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 BST1Q10588 318 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 ANKS1BQ7Z6G8 1248 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 ALYREFQ86V81 257 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 SLC41A1Q8IVJ1 513 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 TOPAZ1Q8N9V7 1692 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 ISM1B1AKI9 464 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 LTA4HP09960 611 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 CXCR2P25025 360 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 CAPZA1P52907 286 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 MPP7Q5T2T1 576 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 GPSM1Q86YR5 675 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 GOLM1Q8NBJ4 401 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 NDRG1Q92597 394 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 TRMT61BQ9BVS5 477 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 OPTCQ9UBM4 332 aa13.78□□□□□ -0.2
RAPGEF1-202ENST00000372190 J3QR89 54 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 SULT1C2O00338 296 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 INPPL1O15357 1258 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZNF208O43345 1280 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 STBD1O95210 358 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 PENKP01210 267 aaPredicted RBP13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 CHRNB1P11230 501 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 IDH3GP51553 393 aaPredicted RBP13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 PTGR1Q14914 329 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 USP30Q70CQ3 517 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 MFSD2AQ8NA29 543 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 RFKQ969G6 155 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 FEM1CQ96JP0 617 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 CDADC1Q9BWV3 514 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZDHHC4Q9NPG8 344 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZMAT5Q9UDW3 170 aaKnown RBP13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 IKZF2Q9UKS7 526 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 A8MUI8 341 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 EPHB6O15197 1021 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 BANF1O75531 89 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 FGF18O76093 207 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 KAT7O95251 611 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 BMP6P22004 513 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 ALG10BQ5I7T1 473 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 ZC3HC1Q86WB0 502 aaKnown RBP13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 SGCDQ92629 289 aa13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 SEMA4BQ9NPR2 832 aaPredicted RBP13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 INTS7Q9NVH2 962 aaKnown RBP13.77□□□□□ -0.2
RAPGEF1-202ENST00000372190 AVILO75366 819 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 CST3P01034 146 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 GTF2F2P13984 249 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 PRKCHP24723 683 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 PRKAR1BP31321 381 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 SP2Q02086 613 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 SLC13A2Q13183 592 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 SIM2Q14190 667 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 NKAPLQ5M9Q1 402 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 SVOPLQ8N434 492 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 TMEM68Q96MH6 324 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 UFSP2Q9NUQ7 469 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 CRYBG1Q9Y4K1 1723 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 COL6A1P12109 1028 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 LPOP22079 712 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 RBM48Q5RL73 367 aaKnown RBP13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 USP51Q70EK9 711 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 HID1Q8IV36 788 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 OR10H5Q8NGA6 315 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 SLC39A8Q9C0K1 460 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 PPA2Q9H2U2 334 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 ASF1AQ9Y294 204 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 NOP16Q9Y3C1 178 aaKnown RBP13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 PLEKHM1Q9Y4G2 1056 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 RHPN2P1A8MT19 583 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 UGT2B17O75795 530 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 TLX1P31314 330 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 DLSTP36957 453 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 GRIA4P48058 902 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 BNIP3Q12983 259 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 NOMO1Q15155 1222 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 ZNHIT3Q15649 155 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 ASTE1Q2TB18 679 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 GPAT3Q53EU6 434 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 SNX33Q8WV41 574 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 SCRN2Q96FV2 425 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 SLC41A3Q96GZ6 507 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 HNRNPABQ99729 332 aaKnown RBP13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 MCMBPQ9BTE3 642 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 IFT27Q9BW83 186 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 IKZF4Q9H2S9 585 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 FZD8Q9H461 694 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 SLA2Q9H6Q3 261 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 ADGRE2Q9UHX3 823 aa13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 EIF2B4Q9UI10 523 aaKnown RBP13.77□□□□□ -0.21
RAPGEF1-202ENST00000372190 A0A0U1RQF3 1178 aa13.76□□□□□ -0.21
RAPGEF1-202ENST00000372190 SLC25A12O75746 678 aa13.76□□□□□ -0.21
RAPGEF1-202ENST00000372190 UBXN7O94888 489 aa13.76□□□□□ -0.21
RAPGEF1-202ENST00000372190 NR2F1P10589 423 aa13.76□□□□□ -0.21
RAPGEF1-202ENST00000372190 RPL22P35268 128 aaKnown RBP13.76□□□□□ -0.21
RAPGEF1-202ENST00000372190 MAGEA11P43364 429 aa13.76□□□□□ -0.21
RAPGEF1-202ENST00000372190 DGKEP52429 567 aa13.76□□□□□ -0.21
RAPGEF1-202ENST00000372190 SLC18A2Q05940 514 aa13.76□□□□□ -0.21
RAPGEF1-202ENST00000372190 ZDHHC20Q5W0Z9 365 aa13.76□□□□□ -0.21
RAPGEF1-202ENST00000372190 NEPROQ6NW34 567 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms