RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SORCS3Q9UPU3 1222 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 ITM2BQ9Y287 266 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 MAN2B2Q9Y2E5 1009 aa3.51□□□□□ -1.85
MCF2-202ENST00000370573 CFAP20Q9Y6A4 193 aaKnown RBP3.51□□□□□ -1.85
MCF2-202ENST00000370573 C1orf232A0A0U1RR37 186 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 A0A1W2PPM1 405 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 A0A1W2PQ67 120 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 C2orf81A6NN90 581 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 MID1O15344 667 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 STX7O15400 261 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 CD3EAPO15446 510 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 SLC7A4O43246 635 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 SYNCRIPO60506 623 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 HAUS5O94927 633 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 MPIG6BO95866 241 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 GOT2P00505 430 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 AHSGP02765 367 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 MYZAPP0CAP1 466 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 HOXB2P14652 356 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 MMP12P39900 470 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 P2RY2P41231 377 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 STC1P52823 247 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 STARD6P59095 220 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 TAS2R38P59533 333 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 POLR2LP62875 67 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 MGAT2Q10469 447 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 FOXO1Q12778 655 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 TARDBPQ13148 414 aaKnown RBP eCLIP3.5□□□□□ -1.85
MCF2-202ENST00000370573 LAMB3Q13751 1172 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 BMPR2Q13873 1038 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 RASA2Q15283 850 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 CST6Q15828 149 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 KHDC1Q4VXA5 237 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 WDR45BQ5MNZ6 344 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 PIP5KL1Q5T9C9 394 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 AGBL2Q5U5Z8 902 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 KCTD16Q68DU8 428 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 ZNF449Q6P9G9 518 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 PACS1Q6VY07 963 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 LIPIQ6XZB0 460 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 ZNF852Q6ZMS4 543 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 ERN2Q76MJ5 926 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 HSD11B1LQ7Z5J1 315 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 KRT77Q7Z794 578 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 LRRTM4Q86VH4 590 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 SLC26A11Q86WA9 606 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 LRRC6Q86X45 466 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 CNTN4Q8IWV2 1026 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 PIANPQ8IYJ0 282 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 PCYOX1LQ8NBM8 494 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 GPR26Q8NDV2 337 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 OR1N1Q8NGS0 311 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 GPR150Q8NGU9 434 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 OR2T3Q8NH03 318 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 OR4L1Q8NH43 312 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 RPLP0P6Q8NHW5 317 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 PEX13Q92968 403 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 MSANTD3Q96H12 275 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 ASB2Q96Q27 587 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 CENPHQ9H3R5 247 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 MFSD1Q9H3U5 465 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 FAM96AQ9H5X1 160 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 LMAN1LQ9HAT1 526 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 IL26Q9NPH9 171 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 PPANQ9NQ55 473 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 ARHGEF3Q9NR81 526 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 PSMC3IPQ9P2W1 217 aaPredicted RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 FETUBQ9UGM5 382 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 FBXO5Q9UKT4 447 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 MTO1Q9Y2Z2 717 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 A0A0C4DFX4 3053 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 SCN8AQ9UQD0 1980 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 NUMA1Q14980 2115 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 ISM1B1AKI9 464 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 B8ZZF3 427 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 H7C0S8 307 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 HGSO14964 777 aaPredicted RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 RGS16O15492 202 aaPredicted RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 FOXD2O60548 495 aaPredicted RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 CDH16O75309 829 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 IVLP07476 585 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 CYP2A6P11509 494 aaPredicted RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 ADRB3P13945 408 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 JUPP14923 745 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 UGT1A6P19224 532 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 UGT1A1P22309 533 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 UGT1A4P22310 534 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 FOXN2P32314 431 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 UGT1A3P35503 534 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 UGT1A5P35504 534 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 SLC1A2P43004 574 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 SPINT3P49223 89 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 PGGT1BP53609 377 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 MAGOHP61326 146 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 RPS16P62249 146 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 PPARDQ03181 441 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 PRKG2Q13237 762 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 THOC5Q13769 683 aaKnown RBP3.5□□□□□ -1.85
MCF2-202ENST00000370573 TMED2Q15363 201 aa3.5□□□□□ -1.85
MCF2-202ENST00000370573 CHRNA6Q15825 494 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms