RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 BCAS2O75934 225 aaPredicted RBP16.84■□□□□ 0.29
UBE3D-203ENST00000369747 CAPN1P07384 714 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 VCLP18206 1134 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 CAPN3P20807 821 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 PFN3P60673 137 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 IRX1P78414 480 aaPredicted RBP16.84■□□□□ 0.29
UBE3D-203ENST00000369747 SULT1C3Q6IMI6 304 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 TMEM220Q6QAJ8 160 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 LAYNQ6UX15 382 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 SLC36A4Q6YBV0 504 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 Q6ZSR9 355 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 WDR5BQ86VZ2 330 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 ZNF547Q8IVP9 402 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 METTL6Q8TCB7 284 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 UBTD2Q8WUN7 234 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 SLC45A3Q96JT2 553 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 ZNF184Q99676 751 aaPredicted RBP16.84■□□□□ 0.29
UBE3D-203ENST00000369747 CCT7Q99832 543 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 EGFL8Q99944 293 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 IPPKQ9H8X2 491 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 SPAG4Q9NPE6 437 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 SLC52A3Q9NQ40 469 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 CROTQ9UKG9 612 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 DMTF1Q9Y222 760 aa16.84■□□□□ 0.29
UBE3D-203ENST00000369747 C9JVG2 144 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 OR56A5P0C7T3 313 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 TCN1P20061 433 aaPredicted RBP16.83■□□□□ 0.28
UBE3D-203ENST00000369747 HTR6P50406 440 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 GBX1Q14549 363 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 VPS26BQ4G0F5 336 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 ARMCX6Q7L4S7 300 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 TRAPPC5Q8IUR0 188 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 BHLHE22Q8NFJ8 381 aaPredicted RBP16.83■□□□□ 0.28
UBE3D-203ENST00000369747 N4BP2L2Q92802 583 aaPredicted RBP16.83■□□□□ 0.28
UBE3D-203ENST00000369747 ROPN1LQ96C74 230 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 SLC6A18Q96N87 628 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 CD244Q9BZW8 370 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 BRINP2Q9C0B6 783 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 ZCCHC2Q9C0B9 1178 aaKnown RBP16.83■□□□□ 0.28
UBE3D-203ENST00000369747 MRPL40Q9NQ50 206 aaKnown RBP16.83■□□□□ 0.28
UBE3D-203ENST00000369747 PFDN4Q9NQP4 134 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 TMEM181Q9P2C4 612 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 MAP10Q9P2G4 905 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 SUCOQ9UBS9 1254 aaKnown RBP16.83■□□□□ 0.28
UBE3D-203ENST00000369747 FAM8A1Q9UBU6 413 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 CD300AQ9UGN4 299 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 CUL9Q8IWT3 2517 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 THADAQ6YHU6 1953 aa16.83■□□□□ 0.28
UBE3D-203ENST00000369747 TNFRSF10AO00220 468 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 VEGFDO43915 354 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 LILRB5O75023 590 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 OTCP00480 354 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 CD27P26842 260 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 AOAHP28039 575 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 ARL1P40616 181 aaPredicted RBP16.82■□□□□ 0.28
UBE3D-203ENST00000369747 GDF5P43026 501 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 ZFP36L2P47974 494 aaKnown RBP16.82■□□□□ 0.28
UBE3D-203ENST00000369747 ERVK-8P63133 956 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 RPS6KA2Q15349 733 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 C6orf136Q5SQH8 315 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 BLOC1S3Q6QNY0 202 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 MBOAT1Q6ZNC8 495 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 Q6ZSR6 202 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 ABI3BPQ7Z7G0 1075 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 OR13H1Q8NG92 308 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 ASB9Q96DX5 294 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 SLC39A3Q9BRY0 314 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 PCED1AQ9H1Q7 454 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 RIC8BQ9NVN3 520 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 WWOXQ9NZC7 414 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 GULP1Q9UBP9 304 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 BCAP29Q9UHQ4 241 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 NDUFAF1Q9Y375 327 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 HS3ST3A1Q9Y663 406 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 PRORSD1PA6NEY8 169 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 EIF3FO00303 357 aaPredicted RBP16.82■□□□□ 0.28
UBE3D-203ENST00000369747 CACNB4O00305 520 aaPredicted RBP16.82■□□□□ 0.28
UBE3D-203ENST00000369747 KATNA1O75449 491 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 AP2A2O94973 939 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 CEACAM5P06731 702 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 PRLHRP49683 370 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 MRPS22P82650 360 aaKnown RBP16.82■□□□□ 0.28
UBE3D-203ENST00000369747 GRIK2Q13002 908 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 TRIM25Q14258 630 aaKnown RBP16.82■□□□□ 0.28
UBE3D-203ENST00000369747 CRTC3Q6UUV7 619 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 IZUMO2Q6UXV1 221 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 SLC22A18ASQ8N1D0 253 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 SFRP1Q8N474 314 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 PCYOX1LQ8NBM8 494 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 ATP6V1E2Q96A05 226 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 TEX37Q96LM6 180 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 GPATCH1Q9BRR8 931 aaKnown RBP16.82■□□□□ 0.28
UBE3D-203ENST00000369747 C1orf50Q9BV19 199 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 COL25A1Q9BXS0 654 aaPredicted RBP16.82■□□□□ 0.28
UBE3D-203ENST00000369747 MIR1-1HGQ9H1L0 117 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 FGF22Q9HCT0 170 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 OPTCQ9UBM4 332 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 FBXO4Q9UKT5 387 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 PSMD13Q9UNM6 376 aa16.82■□□□□ 0.28
UBE3D-203ENST00000369747 HRO43593 1189 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms