RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 PDZD3Q86UT5 571 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 SLC13A3Q8WWT9 602 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 CPNE2Q96FN4 548 aaPredicted RBP8.08□□□□□ -1.12
SSR2-202ENST00000368311 CEP41Q9BYV8 373 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 MUC13Q9H3R2 512 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 NEUROD4Q9HD90 331 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 MKKSQ9NPJ1 570 aaPredicted RBP8.08□□□□□ -1.12
SSR2-202ENST00000368311 NOP53Q9NZM5 478 aaKnown RBP8.08□□□□□ -1.12
SSR2-202ENST00000368311 TMEM59LQ9UK28 342 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 LINC01565O15544 149 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 PLRG1O43660 514 aaKnown RBP8.08□□□□□ -1.12
SSR2-202ENST00000368311 SPAG7O75391 227 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 UROSP10746 265 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 TIMP2P16035 220 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 HMGCLP35914 325 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 KCNC1P48547 511 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 SEPHS1P49903 392 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 ESRRGP62508 458 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 LRIF1Q5T3J3 769 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 ARL9Q6T311 187 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 TMPRSS12Q86WS5 348 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 CILP2Q8IUL8 1156 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 KCNC2Q96PR1 638 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 VPS35Q96QK1 796 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 GPR21Q99679 349 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 ZFYVE21Q9BQ24 234 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 ABCG8Q9H221 673 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 L2HGDHQ9H9P8 463 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 LEF1Q9UJU2 399 aaPredicted RBP8.08□□□□□ -1.12
SSR2-202ENST00000368311 ECM29Q5VYK3 1845 aa8.08□□□□□ -1.12
SSR2-202ENST00000368311 VILLO15195 856 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 TGDSO95455 350 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 UMPSP11172 480 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 EEF1DP29692 281 aaKnown RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 IL12RB1P42701 662 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 HSD11B2P80365 405 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 ALDH6A1Q02252 535 aaKnown RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 SLC10A7Q0GE19 358 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 SPEM2Q0P670 501 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 NSDHLQ15738 373 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 PFKFB4Q16877 469 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 CCDC81Q6ZN84 652 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 YTHDF3Q7Z739 585 aaKnown RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 PACS2Q86VP3 889 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 RASGEF1AQ8N9B8 481 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 CAPSLQ8WWF8 208 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 KLHL29Q96CT2 875 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 PAAF1Q9BRP4 392 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 TAAR2Q9P1P5 351 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 A8MVJ9 347 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 CLDN7O95471 211 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 SLC7A1P30825 629 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 RORAP35398 523 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 CPA2P48052 419 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 RPL14P50914 215 aaKnown RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 TMPRSS3P57727 454 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 GTF2H2Q13888 395 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 N4BP2L1Q5TBK1 243 aaPredicted RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 OR52E8Q6IFG1 317 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 GTF2H2CQ6P1K8 395 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 LCTLQ6UWM7 567 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 RNF111Q6ZNA4 994 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 SLC41A1Q8IVJ1 513 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 LENG8Q96PV6 779 aaPredicted RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 GAL3ST4Q96RP7 486 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 TWNKQ96RR1 684 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 LRRN3Q9H3W5 708 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 C1GALT1Q9NS00 363 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 KRT84Q9NSB2 600 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 HPF1Q9NWY4 346 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 A0A1B0GVT2 93 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 KLRC4-KLRK1H3BQV0 150 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 CYC1P08574 325 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 ZNF883P0CG24 379 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 MTHFD1P11586 935 aaKnown RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 ACPPP15309 386 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 POLR2CP19387 275 aaPredicted RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 OTX2P32243 289 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 ABCG1P45844 678 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 KCNJ1P48048 391 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 DCDP81605 110 aaKnown RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 CHRNB3Q05901 458 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 CASP8Q14790 479 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 CSRP2Q16527 193 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 MOGQ16653 247 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 FIP1L1Q6UN15 594 aaKnown RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 RASGEF1CQ8N431 466 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 OR4C15Q8NGM1 316 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 PCDH19Q8TAB3 1148 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 NDRG1Q92597 394 aaKnown RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 ARL5BQ96KC2 179 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 MAGEB18Q96M61 343 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 CAMK1GQ96NX5 476 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 SERINC2Q96SA4 455 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 PARD6BQ9BYG5 372 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 SNX15Q9NRS6 342 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 MOCS1Q9NZB8 636 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 ZNF282Q9UDV7 671 aaPredicted RBP8.07□□□□□ -1.12
SSR2-202ENST00000368311 PCDHGA1Q9Y5H4 931 aa8.07□□□□□ -1.12
SSR2-202ENST00000368311 SPO11Q9Y5K1 396 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms