RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ZC3H10Q96K80 434 aaKnown RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 MROH2AA6NES4 1674 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CBSLP0DN79 551 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CBSP35520 551 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 RHEBQ15382 184 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 RASGRP3Q8IV61 690 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 GORASP1Q9BQQ3 440 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 PDZD7Q9H5P4 517 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 FBXW2Q9UKT8 454 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 TTC34A8MYJ7 566 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 TFECO14948 347 aaPredicted RBP9.48□□□□□ -0.89
CUX1-203ENST00000360264 IFNA7P01567 189 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 DNAJA1P31689 397 aaKnown RBP9.48□□□□□ -0.89
CUX1-203ENST00000360264 SCARB2Q14108 478 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 RBM48Q5RL73 367 aaKnown RBP9.48□□□□□ -0.89
CUX1-203ENST00000360264 DUS1LQ6P1R4 473 aaKnown RBP9.48□□□□□ -0.89
CUX1-203ENST00000360264 POMZP3Q6PJE2 187 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 ATG10Q9H0Y0 220 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 VPS29Q9UBQ0 182 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 PCDHB3Q9Y5E6 796 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 MSI1O43347 362 aaKnown RBP9.48□□□□□ -0.89
CUX1-203ENST00000360264 GDI2P50395 445 aaKnown RBP9.48□□□□□ -0.89
CUX1-203ENST00000360264 UGCGQ16739 394 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 PRPF38BQ5VTL8 546 aaKnown RBP9.48□□□□□ -0.89
CUX1-203ENST00000360264 DQX1Q8TE96 717 aaKnown RBP9.48□□□□□ -0.89
CUX1-203ENST00000360264 ARFGEF3Q5TH69 2177 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 DIP2CQ9Y2E4 1556 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 AGPSO00116 658 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 PCDH7O60245 1069 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 HLA-DPB1P04440 258 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 EPCAMP16422 314 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 RFC2P35250 354 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 HERVK_113P63132 956 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 KCNJ2P63252 427 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 FPGSQ05932 587 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 ERVK-6Q9BXR3 956 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.48□□□□□ -0.89
CUX1-203ENST00000360264 IL36AQ9UHA7 158 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 MED12Q93074 2177 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 GLP1RP43220 463 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 CAPZA1P52907 286 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 TSTD2Q5T7W7 516 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 SLC9A4Q6AI14 798 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 REP15Q6BDI9 236 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 KREMEN2Q8NCW0 462 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 AGRPO00253 132 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 SHBGP04278 402 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 CYP4F8P98187 520 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 C3P1Q6ZMU1 363 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 RAB11FIP2Q7L804 512 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 IGSF9Q9P2J2 1179 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 PLA2G16P53816 162 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 LRRC70Q7Z2Q7 622 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 P2RY8Q86VZ1 359 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 GTF3C1Q12789 2109 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 CCDC85CA6NKD9 419 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 HSPB3Q12988 150 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 KLF10Q13118 480 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 RPL13AP3Q6NVV1 102 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 LNX1Q8TBB1 728 aaPredicted RBP9.48□□□□□ -0.89
CUX1-203ENST00000360264 ZCCHC10Q8TBK6 192 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 SLC13A3Q8WWT9 602 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 NXNL1Q96CM4 212 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 HMCESQ96FZ2 354 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 SLC32A1Q9H598 525 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 ABCB9Q9NP78 766 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 PLEKHA6Q9Y2H5 1048 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 SPEF1Q9Y4P9 236 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 PPEF2O14830 753 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 KLRC4O43908 158 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 CSNK2A2P19784 350 aaPredicted RBP9.48□□□□□ -0.89
CUX1-203ENST00000360264 KCNJ5P48544 419 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 AKR1D1P51857 326 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 ASB18Q6ZVZ8 466 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 OR10G2Q8NGC3 310 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 ATP6AP2O75787 350 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 TRAM1Q15629 374 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 PRAMEF19Q5SWL8 479 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 GSTCDQ8NEC7 633 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 CREB3L1Q96BA8 519 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 SH3PXD2BA1X283 911 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 FAM163BP0C2L3 166 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 MC1RQ01726 317 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 TMEM68Q96MH6 324 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 FUCA2Q9BTY2 467 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 EFCAB11Q9BUY7 163 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 DISC1C4P0D8 188 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 SLC22A1O15245 554 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 SEPT4O43236 478 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 GALK1P51570 392 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 TMBIM6P55061 237 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 GRIK5Q16478 980 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 GK5Q6ZS86 529 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 PLA2G15Q8NCC3 412 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 HPS1Q92902 700 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 TIGARQ9NQ88 270 aa9.48□□□□□ -0.89
CUX1-203ENST00000360264 GMFGO60234 142 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 IL33O95760 270 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 TSPAN8P19075 237 aa9.47□□□□□ -0.89
CUX1-203ENST00000360264 FSHRP23945 695 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms