RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TRIT1Q9H3H1 467 aaKnown RBP13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 WDR55Q9H6Y2 383 aaPredicted RBP13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 PSMD13Q9UNM6 376 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 THADAQ6YHU6 1953 aa13.45□□□□□ -0.26
PDLIM5-203ENST00000359265 KRT87PA6NCN2 255 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 PRR19A6NJB7 356 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 PDZK1P1A8MUH7 402 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 VPS4BO75351 444 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 RASGRP1O95267 797 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 SLC16A8O95907 504 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 JUNP05412 331 aaKnown RBP13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 TDGF1P13385 188 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 HGFP14210 728 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 EPHA3P29320 983 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 PRDX3P30048 256 aaKnown RBP13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 FNTBP49356 437 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 FOXA1P55317 472 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 ERVPABLB-1P60509 514 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 SRP54P61011 504 aaKnown RBP13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 NAE1Q13564 534 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 ALG11Q2TAA5 492 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 LSM12Q3MHD2 195 aaKnown RBP13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 UGT3A2Q3SY77 523 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 GALNTL6Q49A17 601 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 CCSMST1Q4G0I0 132 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 NXNQ6DKJ4 435 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 CAPRIN2Q6IMN6 1127 aaKnown RBP13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 LETMD1Q6P1Q0 360 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 RD3Q7Z3Z2 195 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 DDIASQ8IXT1 998 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 SYTL1Q8IYJ3 562 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 RAB42Q8N4Z0 105 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 CDYL2Q8N8U2 506 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 OR56A3Q8NH54 315 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 OR5K2Q8NHB8 316 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 CEP70Q8NHQ1 597 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 CCT7Q99832 543 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 SLC29A3Q9BZD2 475 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 DUSP15Q9H1R2 295 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 ACTR8Q9H981 624 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 SAR1AQ9NR31 198 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 AASDHPPTQ9NRN7 309 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 GPR27Q9NS67 375 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 TXLNGQ9NUQ3 528 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 MRGBPQ9NV56 204 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 ZSCAN32Q9NX65 697 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 SPATA7Q9P0W8 599 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 ZNF225Q9UK10 706 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 INVSQ9Y283 1065 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 TIMM22Q9Y584 194 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 DNAJC15Q9Y5T4 150 aa13.44□□□□□ -0.26
PDLIM5-203ENST00000359265 TDRD6O60522 2096 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 A0A1B0GTL3 188 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 ZNF839A8K0R7 811 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 E9PBE3 544 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 PIP5K1BO14986 540 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 KLHL41O60662 606 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 ATP5HO75947 161 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 CLDN9O95484 217 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 CAPN1P07384 714 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 THEGLP0DJG4 465 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 NCF2P19878 526 aaPredicted RBP13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 ITPKAP23677 461 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 RPL10P27635 214 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 HSD17B2P37059 387 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 HALP42357 657 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 BNIP1Q12981 228 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 UAP1L1Q3KQV9 507 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 GGTA1PQ4G0N0 100 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 WDR45BQ5MNZ6 344 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 TPRG1LQ5T0D9 272 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 RALGAPA1Q6GYQ0 2036 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 CAPN13Q6MZZ7 669 aaPredicted RBP13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 UNQ6494/PRO21346Q6UXR6 183 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 LPCAT2Q7L5N7 544 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 THOC6Q86W42 341 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 DCP2Q8IU60 420 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 HID1Q8IV36 788 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 TBC1D21Q8IYX1 336 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 OR5AR1Q8NGP9 310 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 METTL6Q8TCB7 284 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 TSACCQ96A04 125 aaPredicted RBP13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 PYCR2Q96C36 320 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 MED8Q96G25 268 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 KLHDC7BQ96G42 594 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 C12orf66Q96MD2 445 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 HSPA12BQ96MM6 686 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 CDK15Q96Q40 435 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 ORAI3Q9BRQ5 295 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 TUBB6Q9BUF5 446 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 ACTR5Q9H9F9 607 aaPredicted RBP13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 TRNAU1APQ9NX07 287 aaKnown RBP13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 GPRC5BQ9NZH0 403 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 LNPEPQ9UIQ6 1025 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 LHX6Q9UPM6 363 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 SLC22A14Q9Y267 594 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 BTRCQ9Y297 605 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 PLEKHM1Q9Y4G2 1056 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 HEBP2Q9Y5Z4 205 aa13.43□□□□□ -0.26
PDLIM5-203ENST00000359265 DGKBQ9Y6T7 804 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms