RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 C18orf21Q32NC0 220 aaPredicted RBP18.15■□□□□ 0.5
SNX11-201ENST00000359238 ATP13A5Q4VNC0 1218 aa18.15■□□□□ 0.5
SNX11-201ENST00000359238 ATAT1Q5SQI0 421 aa18.15■□□□□ 0.5
SNX11-201ENST00000359238 CRTC3Q6UUV7 619 aa18.15■□□□□ 0.5
SNX11-201ENST00000359238 PLEKHG7Q6ZR37 379 aa18.15■□□□□ 0.5
SNX11-201ENST00000359238 FUBP1Q96AE4 644 aaKnown RBP18.15■□□□□ 0.5
SNX11-201ENST00000359238 SOX17Q9H6I2 414 aaPredicted RBP18.15■□□□□ 0.5
SNX11-201ENST00000359238 CLDND1Q9NY35 253 aa18.15■□□□□ 0.5
SNX11-201ENST00000359238 PTGDR2Q9Y5Y4 395 aa18.15■□□□□ 0.5
SNX11-201ENST00000359238 BRWD1Q9NSI6 2320 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 WASH3PC4AMC7 463 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 BTN3A1O00481 513 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 POP4O95707 220 aaKnown RBP18.14■□□□□ 0.49
SNX11-201ENST00000359238 SLC26A3P40879 764 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 FOXA1P55317 472 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 TPTEP56180 551 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 TIGD2Q4W5G0 525 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 RBM48Q5RL73 367 aaKnown RBP18.14■□□□□ 0.49
SNX11-201ENST00000359238 TPRG1Q6ZUI0 275 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 RETREG3Q86VR2 466 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 LINGO1Q96FE5 620 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 MCCC1Q96RQ3 725 aaPredicted RBP18.14■□□□□ 0.49
SNX11-201ENST00000359238 LYSMD1Q96S90 227 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 CPEB1Q9BZB8 566 aaKnown RBP18.14■□□□□ 0.49
SNX11-201ENST00000359238 TRPV4Q9HBA0 871 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 POPDC3Q9HBV1 291 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 EGFL7Q9UHF1 273 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 CXorf51AA0A1B0GTR3 108 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 B4GAT1O43505 415 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 IMPDH1P20839 514 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 PTGER3P43115 390 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 B4GALNT1Q00973 533 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 PGS1Q32NB8 556 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 SPATS1Q496A3 300 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 CES5AQ6NT32 575 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 GDPD4Q6W3E5 623 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 SLC16A12Q6ZSM3 486 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 CUZD1Q86UP6 607 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 MINDY1Q8N5J2 469 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 PAPD5Q8NDF8 572 aaKnown RBP18.14■□□□□ 0.49
SNX11-201ENST00000359238 OR9I1Q8NGQ6 314 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 FGF14Q92915 247 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 SCAMP4Q969E2 229 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 CHFRQ96EP1 664 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 KCNA7Q96RP8 456 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 FUNDC2Q9BWH2 189 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 DERL2Q9GZP9 239 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 EML4Q9HC35 981 aaKnown RBP18.14■□□□□ 0.49
SNX11-201ENST00000359238 THG1LQ9NWX6 298 aaKnown RBP18.14■□□□□ 0.49
SNX11-201ENST00000359238 ITM2BQ9Y287 266 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 PPIL1Q9Y3C6 166 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 DGKBQ9Y6T7 804 aa18.14■□□□□ 0.49
SNX11-201ENST00000359238 TRBV5-4A0A0C4DH59 114 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 PLK4O00444 970 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 ARPC2O15144 300 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 MTX2O75431 263 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 ALBP02768 609 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 ACRV1P26436 265 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 KPNA2P52292 529 aaKnown RBP18.13■□□□□ 0.49
SNX11-201ENST00000359238 SH3BP2P78314 561 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 SKIV2LQ15477 1246 aaKnown RBP18.13■□□□□ 0.49
SNX11-201ENST00000359238 PARM1Q6UWI2 310 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 PIWIL3Q7Z3Z3 882 aaKnown RBP18.13■□□□□ 0.49
SNX11-201ENST00000359238 SNX20Q7Z614 316 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 MMAAQ8IVH4 418 aaKnown RBP18.13■□□□□ 0.49
SNX11-201ENST00000359238 FUNDC1Q8IVP5 155 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 KIAA1191Q96A73 305 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 MUS81Q96NY9 551 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 RPP25Q9BUL9 199 aaKnown RBP18.13■□□□□ 0.49
SNX11-201ENST00000359238 S1PR5Q9H228 398 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 MOV10Q9HCE1 1003 aaKnown RBP18.13■□□□□ 0.49
SNX11-201ENST00000359238 MAP10Q9P2G4 905 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 ENPP5Q9UJA9 477 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 NDUFAF1Q9Y375 327 aa18.13■□□□□ 0.49
SNX11-201ENST00000359238 MUC22E2RYF6 1773 aaPredicted RBP18.13■□□□□ 0.49
SNX11-201ENST00000359238 PRMT5O14744 637 aaPredicted RBP18.12■□□□□ 0.49
SNX11-201ENST00000359238 UGT2B11O75310 529 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 VPS26AO75436 327 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 NNMTP40261 264 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 RECQLP46063 649 aaPredicted RBP18.12■□□□□ 0.49
SNX11-201ENST00000359238 DNASE1L3Q13609 305 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 UGT3A1Q6NUS8 523 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 HSD11B1LQ7Z5J1 315 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 DSG4Q86SJ6 1040 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 TBC1D21Q8IYX1 336 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 SPARTQ8N0X7 666 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 KCNJ9Q92806 393 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.12■□□□□ 0.49
SNX11-201ENST00000359238 MUC13Q9H3R2 512 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 DEC1Q9P2X7 70 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 SUPT3HB4E1H0 165 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 E5RI56 91 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 H0Y858 1186 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 HOXB8P17481 243 aaPredicted RBP18.12■□□□□ 0.49
SNX11-201ENST00000359238 CRHBPP24387 322 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 PRDX3P30048 256 aaKnown RBP18.12■□□□□ 0.49
SNX11-201ENST00000359238 SPAM1P38567 509 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 ARPC4P59998 168 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 STX1BP61266 288 aa18.12■□□□□ 0.49
SNX11-201ENST00000359238 NEK10Q6ZWH5 1172 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms