RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 PDE12Q6L8Q7 609 aaKnown RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 MON1AQ86VX9 555 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 HORMAD1Q86X24 394 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 ZNF280BQ86YH2 543 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 HIPK1Q86Z02 1210 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 ATP6V0D2Q8N8Y2 350 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 OR52J3Q8NH60 311 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 PHF10Q8WUB8 498 aaKnown RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 C1orf74Q96LT6 269 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 CCDC115Q96NT0 180 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 NEK6Q9HC98 313 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 DDX28Q9NUL7 540 aaKnown RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 ERVK13-1Q9NX77 482 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 KLHL3Q9UH77 587 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 WBP4O75554 376 aaKnown RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 LPOP22079 712 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 HOXD9P28356 352 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 GNPDA1P46926 289 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 IDH2P48735 452 aaKnown RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 HUNKP57058 714 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 RPP38P78345 283 aaKnown RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 MRPS6P82932 125 aaKnown RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 ARHGEF7Q14155 803 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 TPRG1LQ5T0D9 272 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 OR2T5Q6IEZ7 315 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 METTL4Q8N3J2 472 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 OR2T29Q8NH02 315 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 ZNF486Q96H40 463 aaPredicted RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 KCNS3Q9BQ31 491 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 CENPOQ9BU64 300 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 C1QTNF3Q9BXJ4 246 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 RUBCNLQ9H714 662 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 PARVBQ9HBI1 364 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 LATS2Q9NRM7 1088 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 OSGIN1Q9UJX0 560 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 RAI2Q9Y5P3 530 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 DICER1Q9UPY3 1922 aaKnown RBP9.89□□□□□ -0.83
PTPRA-203ENST00000356147 MICAL3Q7RTP6 2002 aa9.89□□□□□ -0.83
PTPRA-203ENST00000356147 DOCK4Q8N1I0 1966 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 CCNKO75909 580 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 OTCP00480 354 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 HOXB8P17481 243 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-203ENST00000356147 SLC6A4P31645 630 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 CLCN7P51798 805 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 ZNF648Q5T619 568 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-203ENST00000356147 CACHD1Q5VU97 1274 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 GDPD3Q7L5L3 318 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 PARP16Q8N5Y8 322 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 PPP3R2Q96LZ3 170 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 SEPT5Q99719 369 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-203ENST00000356147 COPS4Q9BT78 406 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 TTPALQ9BTX7 342 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 TRIM62Q9BVG3 475 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 ADARB2Q9NS39 739 aaKnown RBP9.88□□□□□ -0.83
PTPRA-203ENST00000356147 SLC6A14Q9UN76 642 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 PRSS21Q9Y6M0 314 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 ZFP37Q9Y6Q3 630 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-203ENST00000356147 HTTP42858 3142 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 PRRC2BQ5JSZ5 2229 aaKnown RBP9.88□□□□□ -0.83
PTPRA-203ENST00000356147 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.88□□□□□ -0.83
PTPRA-203ENST00000356147 M0R082 166 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 DSCR3O14972 297 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 RGS14O43566 566 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 NUAK1O60285 661 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 GUCY1B2O75343 617 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 CPSF4O95639 269 aaKnown RBP9.88□□□□□ -0.83
PTPRA-203ENST00000356147 NUDT7P0C024 238 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 POU2F1P14859 743 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 S100A3P33764 101 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 SLC19A1P41440 591 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 CASP3P42574 277 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 SGSHP51688 502 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 SHQ1Q6PI26 577 aaKnown RBP9.88□□□□□ -0.83
PTPRA-203ENST00000356147 SETD9Q8NE22 299 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 APH1BQ8WW43 257 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 ADAM2Q99965 735 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 GPR83Q9NYM4 423 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 FAM8A1Q9UBU6 413 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 PADI3Q9ULW8 664 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 PPT2Q9UMR5 302 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 PCDHB9Q9Y5E1 797 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 PLXNB2O15031 1838 aa9.88□□□□□ -0.83
PTPRA-203ENST00000356147 OR2A25A4D2G3 310 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 AGAP5A6NIR3 686 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 UNCXA6NJT0 531 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 CTDSP2O14595 271 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 INSIG1O15503 277 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TLL1O43897 1013 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 AZGP1P25311 298 aaKnown RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 GKP32189 559 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 RPL9P32969 192 aaKnown RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 HTR7P34969 479 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TTPAP49638 278 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 ARHGDIAP52565 204 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TAF1AQ15573 450 aaPredicted RBP9.87□□□□□ -0.83
PTPRA-203ENST00000356147 TIGD6Q17RP2 521 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 ARMC12Q5T9G4 340 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 NXNL2Q5VZ03 156 aa9.87□□□□□ -0.83
PTPRA-203ENST00000356147 GDF6Q6KF10 455 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms