RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SP2Q02086 613 aa14.58□□□□□ -0.07
LMX1B-201ENST00000355497 DAG1Q14118 895 aa14.58□□□□□ -0.07
LMX1B-201ENST00000355497 EIF5AL1Q6IS14 154 aaKnown RBP14.58□□□□□ -0.07
LMX1B-201ENST00000355497 ABHD15Q6UXT9 468 aa14.58□□□□□ -0.07
LMX1B-201ENST00000355497 HFE2Q6ZVN8 426 aa14.58□□□□□ -0.07
LMX1B-201ENST00000355497 TAC4Q86UU9 113 aa14.58□□□□□ -0.07
LMX1B-201ENST00000355497 PYROXD2Q8N2H3 581 aa14.58□□□□□ -0.07
LMX1B-201ENST00000355497 ZNF527Q8NB42 609 aa14.58□□□□□ -0.07
LMX1B-201ENST00000355497 GRHL3Q8TE85 626 aa14.58□□□□□ -0.07
LMX1B-201ENST00000355497 C17orf50Q8WW18 174 aa14.58□□□□□ -0.07
LMX1B-201ENST00000355497 MRIQ9BWK5 157 aa14.58□□□□□ -0.07
LMX1B-201ENST00000355497 CD320Q9NPF0 282 aa14.58□□□□□ -0.07
LMX1B-201ENST00000355497 SLC7A4O43246 635 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 FKTNO75072 461 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 MBOAT1Q6ZNC8 495 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 HDDC3Q8N4P3 179 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 BANPQ8N9N5 519 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 CCDC120Q96HB5 630 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 TFB2MQ9H5Q4 396 aaKnown RBP14.58□□□□□ -0.08
LMX1B-201ENST00000355497 FXYD6-FXYD2A0A087WZ82 144 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 CXCR1P25024 350 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 SLC7A1P30825 629 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 SLC1A2P43004 574 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 MECP2P51608 486 aaKnown RBP14.58□□□□□ -0.08
LMX1B-201ENST00000355497 TAS2R50P59544 299 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 S100A12P80511 92 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 TTLQ8NG68 377 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 TRIM43Q96BQ3 446 aaPredicted RBP14.58□□□□□ -0.08
LMX1B-201ENST00000355497 GPR20Q99678 358 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 FXYD6Q9H0Q3 95 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 HIPK3Q9H422 1215 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 SERINC1Q9NRX5 453 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 PI15O43692 258 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 HSD17B2P37059 387 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 PBX1P40424 430 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 SLC6A9P48067 706 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 ABHD13Q7L211 337 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 CMTR2Q8IYT2 770 aaKnown RBP14.58□□□□□ -0.08
LMX1B-201ENST00000355497 OVCA2Q8WZ82 227 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 ADAD1Q96M93 576 aaKnown RBP14.58□□□□□ -0.08
LMX1B-201ENST00000355497 ZSCAN5AQ9BUG6 496 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 ITPAQ9BY32 194 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 ZNF700Q9H0M5 742 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 PDZD7Q9H5P4 517 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 FAM124BQ9H5Z6 455 aaPredicted RBP14.58□□□□□ -0.08
LMX1B-201ENST00000355497 CLTCQ00610 1675 aaKnown RBP14.58□□□□□ -0.08
LMX1B-201ENST00000355497 EI24O14681 340 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 GABRDO14764 452 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 MT-CYBP00156 380 aaPredicted RBP14.58□□□□□ -0.08
LMX1B-201ENST00000355497 GSTM3P21266 225 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 LHCGRP22888 699 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 GDI2P50395 445 aaKnown RBP14.58□□□□□ -0.08
LMX1B-201ENST00000355497 OR12D2P58182 307 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 ERVK-8P63133 956 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 NFKB2Q00653 900 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 FOXM1Q08050 763 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 KLF1Q13351 362 aaPredicted RBP14.58□□□□□ -0.08
LMX1B-201ENST00000355497 HERVK_113Q902F9 699 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 CTPS2Q9NRF8 586 aa14.58□□□□□ -0.08
LMX1B-201ENST00000355497 YES1P07947 543 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 SELPP16109 830 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 EEFSECP57772 596 aaKnown RBP14.57□□□□□ -0.08
LMX1B-201ENST00000355497 ADAM15Q13444 863 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 CLEC12AQ5QGZ9 265 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 PRSS58Q8IYP2 241 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 NXPE1Q8N323 547 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 STOML3Q8TAV4 291 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 NCSTNQ92542 709 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 MTMR10Q9NXD2 777 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 TMEM150CB9EJG8 249 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 SAP18O00422 153 aaKnown RBP14.57□□□□□ -0.08
LMX1B-201ENST00000355497 SHOX2O60902 331 aaPredicted RBP14.57□□□□□ -0.08
LMX1B-201ENST00000355497 SLC24A5Q71RS6 500 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 HTATIP2Q9BUP3 242 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 SMURF1Q9HCE7 757 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 P2RX2Q9UBL9 471 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 C14orf166Q9Y224 244 aaKnown RBP14.57□□□□□ -0.08
LMX1B-201ENST00000355497 POFUT2Q9Y2G5 429 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 PCDHGB2Q9Y5G2 931 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 A0A1B0GVC2 190 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 K7EPI3 171 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 RHBDL3P58872 404 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 DSTNP60981 165 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 SPIN3Q5JUX0 258 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 TLCD1Q96CP7 247 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 ACBD6Q9BR61 282 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 EMC3Q9P0I2 261 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 AQP12BA6NM10 295 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 ALPPL2P10696 532 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 VITQ6UXI7 678 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 AQP12AQ8IXF9 295 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 YIPF7Q8N8F6 280 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 SNIP1Q8TAD8 396 aaKnown RBP14.57□□□□□ -0.08
LMX1B-201ENST00000355497 TRPM4Q8TD43 1214 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 ARMC5Q96C12 935 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 SLC35A5Q9BS91 424 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 DPEP3Q9H4B8 488 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 PNO1Q9NRX1 252 aaKnown RBP14.57□□□□□ -0.08
LMX1B-201ENST00000355497 TNFRSF10DQ9UBN6 386 aa14.57□□□□□ -0.08
LMX1B-201ENST00000355497 ABCA9Q8IUA7 1624 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms