RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 SAMHD1Q9Y3Z3 626 aaKnown RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 ZNF860A6NHJ4 632 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 PIP5K1BO14986 540 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 BCAT2O15382 392 aaPredicted RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 ALOX5P09917 674 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 UBTFL6P0CB48 400 aaPredicted RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 PRG2P13727 222 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 ITGA3P26006 1051 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 HKDC1Q2TB90 917 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 GALNT7Q86SF2 657 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 RTN4RL1Q86UN2 441 aaPredicted RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 TMEM173Q86WV6 379 aaPredicted RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 CPXM2Q8N436 756 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 DLG3Q92796 817 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 TEFMQ96QE5 360 aaKnown RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 GATA5Q9BWX5 397 aaPredicted RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 TDRD1Q9BXT4 1180 aaKnown RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 SEMA6AQ9H2E6 1030 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 SERINC1Q9NRX5 453 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 DYTNA2CJ06 578 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 PLIN3O60664 434 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 GDF5P43026 501 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 GSTM5P46439 218 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 DMWDQ09019 674 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 MGAT3Q09327 533 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 DUSP6Q16828 381 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 PLEKHS1Q5SXH7 462 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 FRG2Q64ET8 278 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 AMIGO1Q86WK6 493 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 NAT8LQ8N9F0 302 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 FRG2BQ96QU4 278 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 HERPUD2Q9BSE4 406 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 C9JVG2 144 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 TLX3O43711 291 aaPredicted RBP9.47□□□□□ -0.89
GABPA-201ENST00000354828 NRP2O60462 931 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 MAFKO60675 156 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 IFNGP01579 166 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 CD38P28907 300 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 SCTRP47872 440 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 SPESP1Q6UW49 350 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 NPAS3Q8IXF0 933 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 RNFT2Q96EX2 444 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 PTCHD1Q96NR3 888 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 HSD3B7Q9H2F3 369 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 A0A1W2PRB8 838 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 CAPN8A6NHC0 703 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 CDC123O75794 336 aaPredicted RBP9.47□□□□□ -0.89
GABPA-201ENST00000354828 SIX3O95343 332 aaPredicted RBP9.47□□□□□ -0.89
GABPA-201ENST00000354828 FBLP22087 321 aaKnown RBP9.47□□□□□ -0.89
GABPA-201ENST00000354828 OTX2P32243 289 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 SLC7A2P52569 658 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 CSNK2BP67870 215 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 IRF9Q00978 393 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 DMTNQ08495 405 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 PRKD1Q15139 912 aaPredicted RBP9.47□□□□□ -0.89
GABPA-201ENST00000354828 TTMPQ5BVD1 217 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 RBM20Q5T481 1227 aaKnown RBP9.47□□□□□ -0.89
GABPA-201ENST00000354828 KIAA0319Q5VV43 1072 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 KLHL24Q6TFL4 600 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 GK5Q6ZS86 529 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 JAZF1Q86VZ6 243 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 MOSPD2Q8NHP6 518 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 TMEM79Q9BSE2 394 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 YIPF4Q9BSR8 244 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 AHSGP02765 367 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 DCNP07585 359 aaKnown RBP9.47□□□□□ -0.89
GABPA-201ENST00000354828 AHCYP23526 432 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 NUDT1P36639 197 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 KHKP50053 298 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 SCAPQ12770 1279 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 RAPSNQ13702 412 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 C1orf189Q5VU69 101 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 NEK5Q6P3R8 708 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 TNFAIP8L2Q6P589 184 aaPredicted RBP9.47□□□□□ -0.89
GABPA-201ENST00000354828 NUP54Q7Z3B4 507 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 CLNKQ7Z7G1 428 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 C1orf52Q8N6N3 182 aaKnown RBP9.47□□□□□ -0.89
GABPA-201ENST00000354828 PTCD3Q96EY7 689 aaKnown RBP9.47□□□□□ -0.89
GABPA-201ENST00000354828 C9orf16Q9BUW7 83 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 DUSP26Q9BV47 211 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 EGFL7Q9UHF1 273 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 PCDHGA2Q9Y5H1 932 aa9.47□□□□□ -0.89
GABPA-201ENST00000354828 TIAM2Q8IVF5 1701 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 CLOCKO15516 846 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 OR1I1O60431 355 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 FAM189BP81408 668 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 HMGCS1Q01581 520 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.46□□□□□ -0.89
GABPA-201ENST00000354828 SP140Q13342 867 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 SNTA1Q13424 505 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 FGL2Q14314 439 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 TSPAN33Q86UF1 283 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 RANBP3LQ86VV4 465 aaPredicted RBP9.46□□□□□ -0.89
GABPA-201ENST00000354828 CILP2Q8IUL8 1156 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 C11orf65Q8NCR3 313 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 NPAS2Q99743 824 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 DEFB126Q9BYW3 111 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 KLHL4Q9C0H6 718 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 OR51B5Q9H339 312 aa9.46□□□□□ -0.89
GABPA-201ENST00000354828 SAR1AQ9NR31 198 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms