RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CLK3P49761 638 aaKnown RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 PKDCCQ504Y2 493 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 RAB41Q5JT25 222 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 CRTC1Q6UUV9 634 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 IL21RQ9HBE5 538 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 PTGDR2Q9Y5Y4 395 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 LINC01553A4QN01 128 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 NPIPB15A6NHN6 443 aaPredicted RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 MYL12BO14950 172 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 PDPK1O15530 556 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 PDE9AO76083 593 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 JUNP05412 331 aaKnown RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 ECHS1P30084 290 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 RGRP47804 291 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 RPS13P62277 151 aaKnown RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 ID2Q02363 134 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 GRIN2CQ14957 1233 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 AAK1Q2M2I8 961 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 ZBTB46Q86UZ6 589 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 ZNF761Q86XN6 746 aaPredicted RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 JSRP1Q96MG2 331 aaPredicted RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 C3orf18Q9UK00 162 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 BMP7P18075 431 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 MLLT3P42568 568 aaPredicted RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 PTPRRQ15256 657 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 TMIGD1Q6UXZ0 262 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 GAREM2Q75VX8 874 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 LPCAT2Q7L5N7 544 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 PIGWQ7Z7B1 504 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 PQLC1Q8N2U9 271 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 C11orf65Q8NCR3 313 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 ANKHQ9HCJ1 492 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 RASSF1Q9NS23 344 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 CD207Q9UJ71 328 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 DHRS7Q9Y394 339 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 CDK5RAP2Q96SN8 1893 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 LOC100506127A0A0U1RQW1 187 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 LIN7AO14910 233 aaPredicted RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 HMGCLP35914 325 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 LEPRP48357 1165 aaKnown RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 RGS8P57771 180 aaPredicted RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 CDC42P60953 191 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 UFM1P61960 85 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 LSM3P62310 102 aaKnown RBP13.37□□□□□ -0.27
SMC6-201ENST00000351948 ZNF234Q14588 700 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 PPP1R3AQ16821 1122 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 MLIPQ5VWP3 458 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 ARHGAP12Q8IWW6 846 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 TERB1Q8NA31 727 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 PHOSPHO2Q8TCD6 241 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 HM13Q8TCT9 377 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 FAM3CQ92520 227 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 SLC22A18Q96BI1 424 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 NECTIN4Q96NY8 510 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 RAB11FIP5Q9BXF6 653 aa13.37□□□□□ -0.27
SMC6-201ENST00000351948 A0A1W2PRB8 838 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 UGT2B17O75795 530 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 TNFAIP8O95379 198 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 SLC35E2BP0CK96 405 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 LAMP2P13473 410 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 UGT2B15P54855 530 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 EPS8Q12929 822 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 OR10Q1Q8NGQ4 319 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 OR9A1PQ8NGU1 263 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 RLN3Q8WXF3 142 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 RTP3Q9BQQ7 232 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 MRM3Q9HC36 420 aaKnown RBP13.36□□□□□ -0.27
SMC6-201ENST00000351948 TPRKBQ9Y3C4 175 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 ADAMTS7Q9UKP4 1686 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 SSC5DA1L4H1 1573 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 H3BNH8 94 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 B4GALT2O60909 372 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 ZBTB11O95625 1053 aaPredicted RBP13.36□□□□□ -0.27
SMC6-201ENST00000351948 G6PDP11413 515 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 ADRB3P13945 408 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 GSCP56915 257 aaPredicted RBP13.36□□□□□ -0.27
SMC6-201ENST00000351948 RANBP10Q6VN20 620 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 OR2T34Q8NGX1 318 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 OR2T3Q8NH03 318 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 RPLP0P6Q8NHW5 317 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 GPR151Q8TDV0 419 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 SLC2A11Q9BYW1 496 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 HEBP1Q9NRV9 189 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 PNO1Q9NRX1 252 aaKnown RBP13.36□□□□□ -0.27
SMC6-201ENST00000351948 HRASLS2Q9NWW9 162 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 MOCS1Q9NZB8 636 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 TESMINQ9Y4I5 508 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 NUMA1Q14980 2115 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 MYOCOSA0A1B0GUC4 107 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 E7ESA3 106 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 HOXD8P13378 290 aaPredicted RBP13.36□□□□□ -0.27
SMC6-201ENST00000351948 TMEM31Q5JXX7 168 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 RSPO2Q6UXX9 243 aaPredicted RBP13.36□□□□□ -0.27
SMC6-201ENST00000351948 NUDT13Q86X67 352 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 PROSER1Q86XN7 944 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 DCUN1D3Q8IWE4 304 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 SAMD4AQ9UPU9 718 aaKnown RBP13.36□□□□□ -0.27
SMC6-201ENST00000351948 TRIM43BA6NCK2 446 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 OPN1SWP03999 348 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 SAGP10523 405 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms