RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ZNF776Q68DI1 518 aaPredicted RBP22.62■■□□□ 1.21
NPAS3-201ENST00000346562 USP43Q70EL4 1123 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 ZNF627Q7L945 461 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 MMAAQ8IVH4 418 aaKnown RBP22.62■■□□□ 1.21
NPAS3-201ENST00000346562 NXPE2Q96DL1 559 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 SCLYQ96I15 445 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 C19orf25Q9UFG5 118 aaPredicted RBP22.62■■□□□ 1.21
NPAS3-201ENST00000346562 PRH1P02810 166 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 ADGRD2Q7Z7M1 963 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 OR4K17Q8NGC6 315 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 FAM129BQ96TA1 746 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 DNAJB9Q9UBS3 223 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 FER1L4A9Z1Z3 1794 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 HMGN1P05114 100 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 SLC9B2Q86UD5 537 aa22.62■■□□□ 1.21
NPAS3-201ENST00000346562 METTL21EPA6NDL7 271 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 NPIPA5E9PKD4 350 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 CBSLP0DN79 551 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 CBSP35520 551 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 DGLUCYQ7Z3D6 616 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 TDRPQ86YL5 185 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 MTERF1Q99551 399 aaKnown RBP22.61■■□□□ 1.21
NPAS3-201ENST00000346562 KLRF1Q9NZS2 232 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 NPIPA1Q9UND3 350 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 HYKKA2RU49 373 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 YJEFN3A6XGL0 299 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 A8MUA0 341 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 KLK3P07288 261 aaPredicted RBP22.61■■□□□ 1.21
NPAS3-201ENST00000346562 EIF2S3P41091 472 aaKnown RBP22.61■■□□□ 1.21
NPAS3-201ENST00000346562 MXD1Q05195 221 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 UTS2BQ765I0 119 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 CLEC4DQ8WXI8 215 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 TFAP2BQ92481 460 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 A0A1W2PQ45 241 aaPredicted RBP22.61■■□□□ 1.21
NPAS3-201ENST00000346562 A0A1W2PQY0 241 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 E7ENX8 843 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 DSTNP60981 165 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 HERVK_113P63132 956 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 THOC7Q6I9Y2 204 aaKnown RBP22.61■■□□□ 1.21
NPAS3-201ENST00000346562 NXPE1Q8N323 547 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 NTAN1Q96AB6 310 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 ERVK-6Q9BXR3 956 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 TIGD5Q53EQ6 642 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 ARSJQ5FYB0 599 aaPredicted RBP22.61■■□□□ 1.21
NPAS3-201ENST00000346562 CCSAPQ6IQ19 270 aaPredicted RBP22.61■■□□□ 1.21
NPAS3-201ENST00000346562 CEP97Q8IW35 865 aa22.61■■□□□ 1.21
NPAS3-201ENST00000346562 NEMP2A6NFY4 417 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 ABLIM1O14639 778 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 EFNA1P20827 205 aaPredicted RBP22.6■■□□□ 1.21
NPAS3-201ENST00000346562 PRPS1L1P21108 318 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 COLEC12Q5KU26 742 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 HFE2Q6ZVN8 426 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 CPNE2Q96FN4 548 aaPredicted RBP22.6■■□□□ 1.21
NPAS3-201ENST00000346562 KAT7O95251 611 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 MYCLP1P12525 358 aaPredicted RBP22.6■■□□□ 1.21
NPAS3-201ENST00000346562 RABGGTBP53611 331 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 LENG8Q96PV6 779 aaPredicted RBP22.6■■□□□ 1.21
NPAS3-201ENST00000346562 SLIT3O75094 1523 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 C9JVG2 144 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 L7N2F9 121 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 ETS2P15036 469 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 VAMP2P63027 116 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 CDKL1Q00532 357 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 FASTKD3Q14CZ7 662 aaKnown RBP22.6■■□□□ 1.21
NPAS3-201ENST00000346562 IQCCQ4KMZ1 466 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 BTBD1Q9H0C5 482 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 ETAA1Q9NY74 926 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 PRAMEF33A0A0G2JMD5 474 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 PRAMEF10O60809 474 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 ERVK-8P63133 956 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 SLC10A6Q3KNW5 377 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 ADGRF1Q5T601 910 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 HBEGFQ99075 208 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 SLC35A5Q9BS91 424 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 LYARQ9NX58 379 aaKnown RBP22.6■■□□□ 1.21
NPAS3-201ENST00000346562 FNIP2Q9P278 1114 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 ANXA8P13928 327 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 WDR45BQ5MNZ6 344 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 SCGB3A2Q96PL1 93 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 POLR2J3Q9H1A7 115 aaKnown RBP22.6■■□□□ 1.21
NPAS3-201ENST00000346562 LDAHQ9H6V9 325 aa22.6■■□□□ 1.21
NPAS3-201ENST00000346562 GSTM3P21266 225 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 RFC2P35250 354 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 BTN3A2P78410 334 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 ZNF613Q6PF04 617 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 ZNF676Q8N7Q3 588 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 VPS29Q9UBQ0 182 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 REXO2Q9Y3B8 237 aaKnown RBP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 MROH2AA6NES4 1674 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 CSTF2P33240 577 aaKnown RBP eCLIP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 ROR2Q01974 943 aaKnown RBP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 CHAF1BQ13112 559 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 GANABQ14697 944 aaKnown RBP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 ARHGAP40Q5TG30 622 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 DRICH1Q6PGQ1 229 aaPredicted RBP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 B3GNT4Q9C0J1 378 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 ZCCHC3Q9NUD5 404 aaKnown RBP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 CHRNA1P02708 482 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 PBX1P40424 430 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 RORCP51449 518 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms