RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CDKL2Q92772 493 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 RNF31Q96EP0 1072 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 NRTNQ99748 197 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 TXNDC16Q9P2K2 825 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 SRPK3Q9UPE1 567 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 TARM1B6A8C7 271 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 MEN1O00255 615 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 RAD51CO43502 376 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 CD63P08962 238 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 HIST1H2AGP0C0S8 130 aaPredicted RBP15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 HIST1H2ADP20671 130 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 MAGP20916 626 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 CCR10P46092 362 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 CYP4F2P78329 520 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 C19orf57Q0VDD7 668 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 CDC20Q12834 499 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 CUL1Q13616 776 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 FRG1Q14331 258 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 GRB7Q14451 532 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 FAM45BPQ6NSW5 357 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 ZNF549Q6P9A3 640 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 FIGLAQ6QHK4 219 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 SYTL1Q8IYJ3 562 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 GPATCH11Q8N954 259 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 LINC01555Q8NAE3 123 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 FBXO15Q8NCQ5 510 aaPredicted RBP15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 FAM45AQ8TCE6 357 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 CD200R1Q8TD46 325 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 CT55Q8WUE5 264 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 TTC9Q92623 222 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 DLG3Q92796 817 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 EXTL1Q92935 676 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 HIST1H2AHQ96KK5 128 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 NDNQ99608 321 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 HIST1H2AJQ99878 128 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 H2AFJQ9BTM1 129 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 NDC1Q9BTX1 674 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 TRIM54Q9BYV2 358 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 GALPQ9UBC7 116 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 IL17BQ9UHF5 180 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 CDC23Q9UJX2 597 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 PCDHGA6Q9Y5G7 932 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 BPTFQ12830 3046 aa15.19■□□□□ 0.02
TSPAN4-201ENST00000346501 ARHGEF33A8MVX0 844 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 FANCGO15287 622 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 ZSCAN9O15535 394 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 ZNF749O43361 778 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 RECKO95980 971 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 AHSGP02765 367 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 C8GP07360 202 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 WT1P19544 449 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 MCM3P25205 808 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 ARSFP54793 590 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 IL2P60568 153 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 CYP2A13Q16696 494 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 WHAMMP3Q1A5X7 153 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 TCTE1Q5JU00 501 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 TEDDM1Q5T9Z0 273 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 THEMIS2Q5TEJ8 643 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 STEAP4Q687X5 459 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 C8orf74Q6P047 294 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 UBE2R2Q712K3 238 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 IGDCC3Q8IVU1 814 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 CPNE9Q8IYJ1 553 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 LMNTD1Q8N9Z9 388 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 MNS1Q8NEH6 495 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 ASB11Q8WXH4 323 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 MED8Q96G25 268 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 VPS39Q96JC1 886 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 PWWP2AQ96N64 755 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 MIPEPQ99797 713 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 MENTQ9BUN1 341 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 TWSG1Q9GZX9 223 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 FAM60AQ9NP50 221 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 SAYSD1Q9NPB0 183 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 GPN3Q9UHW5 284 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 POLHQ9Y253 713 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 FARSAQ9Y285 508 aaKnown RBP15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 PADI2Q9Y2J8 665 aa15.18■□□□□ 0.02
TSPAN4-201ENST00000346501 E7ESA3 106 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 MYO1CO00159 1063 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 NKX2-8O15522 239 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 CREG1O75629 220 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 PIM1P11309 404 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 PTPN4P29074 926 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 PEBP1P30086 187 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 PNLIPRP1P54315 467 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 SLC12A2P55011 1212 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 GPS2Q13227 327 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 SP140Q13342 867 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 ERV3-1Q14264 604 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 TBR1Q16650 682 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 DEFB110Q30KQ9 67 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 SYVN1Q86TM6 617 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 SLC26A11Q86WA9 606 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 MCATQ8IVS2 390 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 DSELQ8IZU8 1212 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 DNAJC22Q8N4W6 341 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 TTC29Q8NA56 475 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 FLVCR1-AS1Q8TAF5 88 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms