RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CDYLQ9Y232 598 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 PTRH2Q9Y3E5 179 aaKnown RBP11.95□□□□□ -0.5
SGCA-202ENST00000344627 FER1L5A0AVI2 2057 aa11.95□□□□□ -0.5
SGCA-202ENST00000344627 ZSCAN9O15535 394 aaPredicted RBP11.94□□□□□ -0.5
SGCA-202ENST00000344627 HCRTR1O43613 425 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 SLCO2B1O94956 709 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 FKBP9O95302 570 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 KRT14P02533 472 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 TPSB2P20231 275 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 CHRM3P20309 590 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 MAGP20916 626 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 CD9P21926 228 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 PEBP1P30086 187 aaKnown RBP11.94□□□□□ -0.5
SGCA-202ENST00000344627 DCDP81605 110 aaKnown RBP11.94□□□□□ -0.5
SGCA-202ENST00000344627 CCZ1BP86790 482 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 CCZ1P86791 482 aaPredicted RBP11.94□□□□□ -0.5
SGCA-202ENST00000344627 MYBPC3Q14896 1274 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 TPSAB1Q15661 275 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 YOD1Q5VVQ6 348 aaPredicted RBP11.94□□□□□ -0.5
SGCA-202ENST00000344627 ZNF385CQ66K41 422 aaPredicted RBP11.94□□□□□ -0.5
SGCA-202ENST00000344627 SLC6A19Q695T7 634 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 CNSTQ6PJW8 725 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 FIGLAQ6QHK4 219 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 LRRC6Q86X45 466 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 MCATQ8IVS2 390 aaKnown RBP11.94□□□□□ -0.5
SGCA-202ENST00000344627 MPP5Q8N3R9 675 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 DNAJC22Q8N4W6 341 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 PRELID2Q8N945 189 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 FLVCR1-AS1Q8TAF5 88 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 DLG3Q92796 817 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 PTERQ96BW5 349 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 KIFC1Q9BW19 673 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 TREX1Q9NSU2 369 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 EURLQ9NYK6 297 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 IL1RAPL1Q9NZN1 696 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 SAMD15Q9P1V8 674 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 RUVBL2Q9Y230 463 aaKnown RBP11.94□□□□□ -0.5
SGCA-202ENST00000344627 B3GNT3Q9Y2A9 372 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 CRYL1Q9Y2S2 319 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 MRFAP1Q9Y605 127 aa11.94□□□□□ -0.5
SGCA-202ENST00000344627 PRRC2CQ9Y520 2896 aaKnown RBP11.93□□□□□ -0.5
SGCA-202ENST00000344627 DOPEY2Q9Y3R5 2298 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 AVILO75366 819 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 S1PR4O95977 384 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 ALBP02768 609 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 CTSBP07858 339 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 PAMP19021 973 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 FOLR3P41439 243 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 GRIA3P42263 894 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 BDKRB1P46663 353 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 ARSFP54793 590 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 TSTA3Q13630 321 aaPredicted RBP11.93□□□□□ -0.5
SGCA-202ENST00000344627 RAPSNQ13702 412 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 ATP1A4Q13733 1029 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 LURAP1LQ8IV03 231 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 LINC01555Q8NAE3 123 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 OR2Y1Q8NGV0 311 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 OR2L8Q8NGY9 312 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 RAD51AP1Q96B01 352 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 MS4A14Q96JA4 679 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 PBKQ96KB5 322 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 NUDT9Q9BW91 350 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 RAB11FIP5Q9BXF6 653 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 P2RY12Q9H244 342 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 MRM3Q9HC36 420 aaKnown RBP11.93□□□□□ -0.5
SGCA-202ENST00000344627 ENAMQ9NRM1 1142 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 AGPAT4Q9NRZ5 378 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 MAP10Q9P2G4 905 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 SOX13Q9UN79 622 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 NFS1Q9Y697 457 aa11.93□□□□□ -0.5
SGCA-202ENST00000344627 CTAGE9A4FU28 777 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 WIPF3A6NGB9 483 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 TCP11X1B4DZS4 312 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 E5RI56 91 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 H3BMM5 538 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 GOLGA8MH3BSY2 632 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 RASGRF2O14827 1237 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 NIPSNAP2O75323 286 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 KLF7O75840 302 aaPredicted RBP11.92□□□□□ -0.5
SGCA-202ENST00000344627 C1orf105O95561 183 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 ONECUT2O95948 504 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 ITGAXP20702 1163 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 RPS3P23396 243 aaKnown RBP eCLIP11.92□□□□□ -0.5
SGCA-202ENST00000344627 UQCRFS1P47985 274 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 THOC5Q13769 683 aaKnown RBP11.92□□□□□ -0.5
SGCA-202ENST00000344627 ELOAQ14241 798 aaKnown RBP11.92□□□□□ -0.5
SGCA-202ENST00000344627 NKAIN1Q4KMZ8 207 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 ZC3H12BQ5HYM0 836 aaKnown RBP11.92□□□□□ -0.5
SGCA-202ENST00000344627 DCAF10Q5QP82 559 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 RNF187Q5TA31 235 aaPredicted RBP11.92□□□□□ -0.5
SGCA-202ENST00000344627 ANKRD22Q5VYY1 191 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 TTLL10Q6ZVT0 673 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 MRGPREQ86SM8 312 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 GALNT16Q8N428 558 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 ZADH2Q8N4Q0 377 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 RBMXL3Q8N7X1 1067 aaKnown RBP11.92□□□□□ -0.5
SGCA-202ENST00000344627 Q8NA96 180 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 MAGEC3Q8TD91 643 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 FKBP10Q96AY3 582 aa11.92□□□□□ -0.5
SGCA-202ENST00000344627 NAP1L3Q99457 506 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms