RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 HMGB4Q8WW32 186 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 RNF31Q96EP0 1072 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 ZDHHC12Q96GR4 267 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 DGAT2Q96PD7 388 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 LPIN3Q9BQK8 851 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 SEMA6AQ9H2E6 1030 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 S100A14Q9HCY8 104 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 MKS1Q9NXB0 559 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 SAGE1Q9NXZ1 904 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 DNAJB9Q9UBS3 223 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 PRODH2Q9UF12 536 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 GMEB2Q9UKD1 530 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 ING4Q9UNL4 249 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 ARAP2Q8WZ64 1704 aa7.55□□□□□ -1.2
ATP2B4-201ENST00000341360 TEX46H3BTG2 121 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 LILRB3O75022 631 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 RCBTB2O95199 551 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 OR5F1O95221 314 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 MT-CYBP00156 380 aaPredicted RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 MPC1LP0DKB6 136 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 FGFR3P22607 806 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 RPS21P63220 83 aaKnown RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 DGCR6Q14129 220 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 SEMA3AQ14563 771 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 NRF1Q16656 503 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 ARSIQ5FYB1 569 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 NCBP2-AS2Q69YL0 99 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 TIFABQ6ZNK6 161 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 NAT8LQ8N9F0 302 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 POF1BQ8WVV4 589 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 FAR1Q8WVX9 515 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 TFGQ92734 400 aaPredicted RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 PPM1MQ96MI6 270 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 GPER1Q99527 375 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 C1orf21Q9H246 121 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 MCCC2Q9HCC0 563 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 MAGEE1Q9HCI5 957 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 ZCCHC3Q9NUD5 404 aaKnown RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 CDH22Q9UJ99 828 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 PCDHB3Q9Y5E6 796 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 N6AMT1Q9Y5N5 214 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 DGKBQ9Y6T7 804 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 RREB1Q92766 1687 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 DCLK1O15075 740 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 LINGO3P0C6S8 592 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 TYRP14679 529 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 HOXD13P35453 343 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 GRIA2P42262 883 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 SLC1A2P43004 574 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 RAB15P59190 212 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 ZNF630Q2M218 657 aaPredicted RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 UMODL1-AS1Q8N2C9 162 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 LIX1Q8N485 282 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 OR2AJ1Q8NGZ0 328 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 P2RY13Q9BPV8 354 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 RIOK2Q9BVS4 552 aaKnown RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 KCNH6Q9H252 994 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 RMI1Q9H9A7 625 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 EQTNQ9NQ60 294 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 TAS2R7Q9NYW3 318 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 PTTG2Q9NZH5 202 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 PDP1Q9P0J1 537 aaPredicted RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 NKX1-2Q9UD57 310 aaPredicted RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 EIF2B4Q9UI10 523 aaKnown RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 FBXW2Q9UKT8 454 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 DMTF1Q9Y222 760 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 HS3ST4Q9Y661 456 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 IRS2Q9Y4H2 1338 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 CICQ96RK0 1608 aaPredicted RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 ARHGEF33A8MVX0 844 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 ENPP3O14638 875 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 POP7O75817 140 aaKnown RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 HLA-DQB2P05538 268 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 SLC7A1P30825 629 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 DNASE1L1P49184 302 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 CYP4F3Q08477 520 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 UBAP2LQ14157 1087 aaKnown RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 SLBPQ14493 270 aaKnown RBP eCLIP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 ELAVL3Q14576 367 aaKnown RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 PLEKHG6Q3KR16 790 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 ACSBG2Q5FVE4 666 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 QSOX2Q6ZRP7 698 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 LAPTM4BQ86VI4 370 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 CCDC36Q8IYA8 594 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 CADM2Q8N3J6 435 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 ZNF784Q8NCA9 323 aaPredicted RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 FLCNQ8NFG4 579 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 OR5K1Q8NHB7 308 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 GEMIN6Q8WXD5 167 aaKnown RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 PTGES2Q9H7Z7 377 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 TAS2R1Q9NYW7 299 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 FLRT1Q9NZU1 646 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 RPL36Q9Y3U8 105 aaKnown RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 NUP98P52948 1817 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 DOCK2Q92608 1830 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 ANKRD36CQ5JPF3 1778 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 PIGBOS1A0A0B4J2F0 54 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 FAM159BA6NKW6 160 aa7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 ELOA3DA6NLF2 546 aaPredicted RBP7.54□□□□□ -1.2
ATP2B4-201ENST00000341360 CASKO14936 926 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms