RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 KCNE2Q9Y6J6 123 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 EML5Q05BV3 1969 aa16.83■□□□□ 0.28
CLDN4-201ENST00000340958 UBDO15205 165 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 ATP5HO75947 161 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 MAOBP27338 520 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 TBPL1P62380 186 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 IRF8Q02556 426 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 DMWDQ09019 674 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 BNIP1Q12981 228 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 TBCCQ15814 346 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 CPSF6Q16630 551 aaKnown RBP eCLIP16.82■□□□□ 0.28
CLDN4-201ENST00000340958 ZXDCQ2QGD7 858 aaPredicted RBP16.82■□□□□ 0.28
CLDN4-201ENST00000340958 ZNF528Q3MIS6 628 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 GALNTL6Q49A17 601 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 LACTB2Q53H82 288 aaPredicted RBP16.82■□□□□ 0.28
CLDN4-201ENST00000340958 SGO1Q5FBB7 561 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 XKR6Q5GH73 641 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 RGL4Q8IZJ4 473 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 SLC22A18ASQ8N1D0 253 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 C2orf73Q8N5S3 287 aaPredicted RBP16.82■□□□□ 0.28
CLDN4-201ENST00000340958 OR56A3Q8NH54 315 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 MARK4Q96L34 752 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 MAGEB10Q96LZ2 347 aaPredicted RBP16.82■□□□□ 0.28
CLDN4-201ENST00000340958 HSPA12BQ96MM6 686 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 IL17FQ96PD4 163 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 CCT7Q99832 543 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 IRF2BPLQ9H1B7 796 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 CCDC177Q9NQR7 707 aaPredicted RBP16.82■□□□□ 0.28
CLDN4-201ENST00000340958 POLG2Q9UHN1 485 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 ZFC3H1O60293 1989 aaKnown RBP16.82■□□□□ 0.28
CLDN4-201ENST00000340958 WDR87Q6ZQQ6 2873 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 OR52A4PA6NMU1 304 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 PRR5-ARHGAP8B1AHC4 643 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 C10orf142B7Z368 130 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 ULK1O75385 1050 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 CBX6O95503 412 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 KRT6AP02538 564 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 KRT6BP04259 564 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 ESRRAP11474 423 aaPredicted RBP16.82■□□□□ 0.28
CLDN4-201ENST00000340958 CTSEP14091 401 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 HSD17B2P37059 387 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 KRT6CP48668 564 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 CHIT1Q13231 466 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 CLCA4Q14CN2 919 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 ZNF542PQ5EBM4 170 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 TCHHL1Q5QJ38 904 aaPredicted RBP16.82■□□□□ 0.28
CLDN4-201ENST00000340958 TMEM198Q66K66 360 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 DCP2Q8IU60 420 aaKnown RBP16.82■□□□□ 0.28
CLDN4-201ENST00000340958 PHACTR4Q8IZ21 702 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 CCL4L1Q8NHW4 92 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 C3orf30Q96M34 536 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 PHOX2BQ99453 314 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 TUBB1Q9H4B7 451 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 ELOVL6Q9H5J4 265 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 AKTIPQ9H8T0 292 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 TRNAU1APQ9NX07 287 aaKnown RBP16.82■□□□□ 0.28
CLDN4-201ENST00000340958 HEBP2Q9Y5Z4 205 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 COLEC10Q9Y6Z7 277 aa16.82■□□□□ 0.28
CLDN4-201ENST00000340958 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 SPTY2D1-AS1A0A0U1RR47 76 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 KDM1AO60341 852 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 GNAZP19086 355 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 CCND1P24385 295 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 CD38P28907 300 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 SCTRP47872 440 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 BLKP51451 505 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 KRT72Q14CN4 511 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 IMPG1Q17R60 797 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 SUSD1Q6UWL2 747 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 PARGQ86W56 976 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 TMEFF1Q8IYR6 380 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 CHCHD4Q8N4Q1 142 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 NELL1Q92832 810 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 NSL1Q96IY1 281 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 MIPEPQ99797 713 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 CCDC106Q9BWC9 280 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 GSDMCQ9BYG8 508 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 SLC29A3Q9BZD2 475 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 ACTR5Q9H9F9 607 aaPredicted RBP16.81■□□□□ 0.28
CLDN4-201ENST00000340958 TBC1D29Q9UFV1 150 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 SNX6Q9UNH7 406 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 DGKBQ9Y6T7 804 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 CAPN7Q9Y6W3 813 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 R4GN57 208 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 FRYLO94915 3013 aa16.81■□□□□ 0.28
CLDN4-201ENST00000340958 E7ENX8 843 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 E7EQ34 232 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 EZRP15311 586 aaKnown RBP16.8■□□□□ 0.28
CLDN4-201ENST00000340958 LBPP18428 481 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 RASSF2P50749 326 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 TAP2Q03519 686 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 FASTKQ14296 549 aaKnown RBP16.8■□□□□ 0.28
CLDN4-201ENST00000340958 RPE65Q16518 533 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 ARMCX6Q7L4S7 300 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 MFSD2AQ8NA29 543 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 MTFMTQ96DP5 389 aaKnown RBP16.8■□□□□ 0.28
CLDN4-201ENST00000340958 HBEGFQ99075 208 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 MVB12BQ9H7P6 319 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 ARL8BQ9NVJ2 186 aa16.8■□□□□ 0.28
CLDN4-201ENST00000340958 SPATA7Q9P0W8 599 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms