RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 C18orf21Q32NC0 220 aaPredicted RBP17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 PTCHD3Q3KNS1 767 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 LIPMQ5VYY2 423 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 CAPN13Q6MZZ7 669 aaPredicted RBP17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 GUSBP11Q6P575 273 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 C10orf107Q8IVU9 208 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 ADGRF3Q8IZF5 1079 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 SREK1Q8WXA9 508 aaKnown RBP17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 CDC6Q99741 560 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 ERVK-6Q9BXR3 956 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 CD244Q9BZW8 370 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 MLXIPLQ9NP71 852 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 CCDC177Q9NQR7 707 aaPredicted RBP17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 KCNK4Q9NYG8 393 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 ENTPD2Q9Y5L3 495 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 GOLGA4Q13439 2230 aaKnown RBP17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 ASCC3Q8N3C0 2202 aaKnown RBP17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 EP300Q09472 2414 aaPredicted RBP17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 CPED1A4D0V7 1026 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 OR5K3A6NET4 321 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 BTN3A3O00478 584 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 UBXN7O94888 489 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 PROS1P07225 676 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 RPS17P08708 135 aaKnown RBP17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 CHRM5P08912 532 aaPredicted RBP17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 EEF1DP29692 281 aaKnown RBP17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 NAA20P61599 178 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 TBPL1P62380 186 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 GPLD1P80108 840 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 KIR2DS3Q14952 304 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 LRRC70Q7Z2Q7 622 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 EFL1Q7Z2Z2 1120 aaKnown RBP17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 PIP4P1Q86T03 277 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 OOSP2Q86WS3 158 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 NUDCD3Q8IVD9 361 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 PPFIBP2Q8ND30 876 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 TMEM237Q96Q45 408 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 MECRQ9BV79 373 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 PCBD2Q9H0N5 130 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 SLC32A1Q9H598 525 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 OGFRQ9NZT2 677 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 IGHV1OR21-1A0A087WYE8 117 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 A0A1W2PPV9 198 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 OR6C74A6NCV1 312 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 K7EPI3 171 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 MATN2O00339 956 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 PRICKLE3O43900 615 aaPredicted RBP17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 GFRA3O60609 400 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 H2AFYO75367 372 aaKnown RBP17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 SIX3O95343 332 aaPredicted RBP17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 ACP1P24666 158 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 OAS2P29728 719 aaKnown RBP17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 CAPZBP47756 277 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 PERM1Q5SV97 790 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 ZNF678Q5SXM1 525 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 SPRED1Q7Z699 444 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 THOC6Q86W42 341 aaKnown RBP17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 LMNTD1Q8N9Z9 388 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 OR6Y1Q8NGX8 325 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 OR10G6Q8NH81 332 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 FAM76AQ8TAV0 307 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 IFI44Q8TCB0 444 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 ESAMQ96AP7 390 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 SLC22A18Q96BI1 424 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 MED8Q96G25 268 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 PAIP2Q9BPZ3 127 aaKnown RBP17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 INTS9Q9NV88 658 aaKnown RBP17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 DNAJC11Q9NVH1 559 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 INTS7Q9NVH2 962 aaKnown RBP17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 HRASLS2Q9NWW9 162 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 OPTCQ9UBM4 332 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 ASB1Q9Y576 335 aa17.29■□□□□ 0.36
SDCBP2-201ENST00000339987 DMDP11532 3685 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 PIPSLA2A3N6 862 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 LRRC14BA6NHZ5 514 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 E2F3O00716 465 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 B4GAT1O43505 415 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 WDR47O94967 919 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 GP1BAP07359 652 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 FGF3P11487 239 aaPredicted RBP17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 AMD1P17707 334 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 ALDH4A1P30038 563 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 PEBP1P30086 187 aaKnown RBP17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 GDF5P43026 501 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 PIK3CGP48736 1102 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 ATP1A2P50993 1020 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 OR1D5P58170 312 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 PRKAA1Q13131 559 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 SQSTM1Q13501 440 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 UNC50Q53HI1 259 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 FBXO48Q5FWF7 155 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 PRAMEF13Q5VWM6 474 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 SUSD1Q6UWL2 747 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 LCTLQ6UWM7 567 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 C2orf73Q8N5S3 287 aaPredicted RBP17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 ZNF483Q8TF39 744 aaPredicted RBP17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 RSC1A1Q92681 617 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 PYCR2Q96C36 320 aa17.28■□□□□ 0.36
SDCBP2-201ENST00000339987 MIPEPQ99797 713 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms