RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ASF1AQ9Y294 204 aa21.77■■□□□ 1.08
PDLIM2-203ENST00000339162 TRIM38O00635 465 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 MAP3K7O43318 606 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 LATO43561 262 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 PRKG2Q13237 762 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 TMEM31Q5JXX7 168 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 FRG2Q64ET8 278 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 SUSD1Q6UWL2 747 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 RNF111Q6ZNA4 994 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 C2orf73Q8N5S3 287 aaPredicted RBP21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 OR56A3Q8NH54 315 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 FRG2BQ96QU4 278 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 C1QTNF2Q9BXJ5 285 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 YY1AP1Q9H869 796 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 C1orf109Q9NX04 203 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 TMEM181Q9P2C4 612 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 EIF3LQ9Y262 564 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 FAM234BA2RU67 622 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 SLC31A1O15431 190 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 FKBP6O75344 327 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 JUPP14923 745 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 VARSP26640 1264 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 TBPL1P62380 186 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 PLIN5Q00G26 463 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 DDX39BQ13838 428 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 NFYCQ13952 458 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 ADNP2Q6IQ32 1131 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 SLC2A7Q6PXP3 512 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 CHST15Q7LFX5 561 aaPredicted RBP21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 KBTBD6Q86V97 674 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 OR5AR1Q8NGP9 310 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 RPLP0P6Q8NHW5 317 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 JADE3Q92613 823 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 LRRC58Q96CX6 371 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 SIPA1Q96FS4 1042 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 IL17FQ96PD4 163 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 GPATCH1Q9BRR8 931 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 PRO3102Q9H379 93 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 DPEP2Q9H4A9 486 aa21.76■■□□□ 1.07
PDLIM2-203ENST00000339162 MYO10Q9HD67 2058 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 SCAMP1O15126 338 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 TRIM23P36406 574 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 MAPK9P45984 424 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 PPP2CBP62714 309 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 PPP2CAP67775 309 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 AGERQ15109 404 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 TLR1Q15399 786 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 TMEM259Q4ZIN3 620 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 LRRC74BQ6ZQY2 392 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 RNF165Q6ZSG1 346 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 ZFAND4Q86XD8 727 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 DNAJB14Q8TBM8 379 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 NEIL2Q969S2 332 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 MTERF1Q99551 399 aaKnown RBP21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 SH2B3Q9UQQ2 575 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 C15orf41Q9Y2V0 281 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 ACOT8O14734 319 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 DRD1P21728 446 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 IRX1P78414 480 aaPredicted RBP21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 MRPS22P82650 360 aaKnown RBP21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 KIAA0040Q15053 153 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 TMEM92Q6UXU6 159 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 KRTCAP2Q8N6L1 136 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 OR9A1PQ8NGU1 263 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 DLGAP4Q9Y2H0 992 aa21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 TDRKHQ9Y2W6 561 aaKnown RBP21.75■■□□□ 1.07
PDLIM2-203ENST00000339162 NME4O00746 187 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 DNAJA2O60884 412 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 SH3BGRLO75368 114 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 WLSQ5T9L3 541 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 AAGABQ6PD74 315 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 APIPQ96GX9 242 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 MRPL40Q9NQ50 206 aaKnown RBP21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 CD300AQ9UGN4 299 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 MOSPD1Q9UJG1 213 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 ANGPTL2Q9UKU9 493 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 EEDO75530 441 aaKnown RBP21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 ACP5P13686 325 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 SLC6A2P23975 617 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 IGFALSP35858 605 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 PLOD1Q02809 727 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 LIPJQ5W064 366 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 KIAA1324Q6UXG2 1013 aaKnown RBP21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 PDZD3Q86UT5 571 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 SLC15A3Q8IY34 581 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 FBXO15Q8NCQ5 510 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 TSPEARQ8WU66 669 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 TFGQ92734 400 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 MRGPRX1Q96LB2 322 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 PRM3Q9NNZ6 103 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 GID8Q9NWU2 228 aa21.74■■□□□ 1.07
PDLIM2-203ENST00000339162 DNAH14Q0VDD8 3507 aa21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 BCAS2O75934 225 aaPredicted RBP21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 BCKDHAP12694 445 aa21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 MAD2L1Q13257 205 aaPredicted RBP21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 TRIM25Q14258 630 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 RABL3Q5HYI8 236 aa21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 CATSPEREQ5SY80 951 aa21.73■■□□□ 1.07
PDLIM2-203ENST00000339162 CACHD1Q5VU97 1274 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms