RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 OGDHLQ9ULD0 1010 aa17.24■□□□□ 0.35
LRCH3-201ENST00000334859 PPT2Q9UMR5 302 aa17.24■□□□□ 0.35
LRCH3-201ENST00000334859 CCL16O15467 120 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 PPM1AP35813 382 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 CDKN2CP42773 168 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 NUP107P57740 925 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 VAC14Q08AM6 782 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 BIRC2Q13490 618 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 LRRC23Q53EV4 343 aaPredicted RBP17.23■□□□□ 0.35
LRCH3-201ENST00000334859 LRIF1Q5T3J3 769 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 FRG2Q64ET8 278 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 TMEM26Q6ZUK4 368 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 THAP5Q7Z6K1 395 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 SVOPLQ8N434 492 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 RNF175Q8N4F7 328 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 PNPT1Q8TCS8 783 aaKnown RBP17.23■□□□□ 0.35
LRCH3-201ENST00000334859 CMTM7Q96FZ5 175 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 EGLN2Q96KS0 407 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 FRG2BQ96QU4 278 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 BBS2Q9BXC9 721 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 LTB4R2Q9NPC1 389 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 TBX21Q9UL17 535 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 DOCK6Q96HP0 2047 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 ABHD14A-ACY1A0A1B0GW23 586 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 H3BMQ9 156 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 RFXANKO14593 260 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 PER2O15055 1255 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 IL7RP16871 459 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 CREMQ03060 361 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 SP140Q13342 867 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 GBX1Q14549 363 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 ZNF773Q6PK81 442 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 GDPD4Q6W3E5 623 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 EID3Q8N140 333 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 BEND7Q8N7W2 519 aaPredicted RBP17.23■□□□□ 0.35
LRCH3-201ENST00000334859 ZNF555Q8NEP9 628 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 B4GALNT2Q8NHY0 566 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 MCOLN3Q8TDD5 553 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 NETO1Q8TDF5 533 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 COG8Q96MW5 612 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 RBM4BQ9BQ04 359 aaKnown RBP17.23■□□□□ 0.35
LRCH3-201ENST00000334859 RBM4Q9BWF3 364 aaKnown RBP17.23■□□□□ 0.35
LRCH3-201ENST00000334859 GPRC5BQ9NZH0 403 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 MAN2B2Q9Y2E5 1009 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 U3KQV3 271 aa17.23■□□□□ 0.35
LRCH3-201ENST00000334859 CFAP99D6REC4 459 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 HS6ST1O60243 411 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 LILRB3O75022 631 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 FGF18O76093 207 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 PABPC1P11940 636 aaKnown RBP17.22■□□□□ 0.35
LRCH3-201ENST00000334859 RECQLP46063 649 aaPredicted RBP17.22■□□□□ 0.35
LRCH3-201ENST00000334859 POLR2LP62875 67 aaKnown RBP17.22■□□□□ 0.35
LRCH3-201ENST00000334859 CHIT1Q13231 466 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 TTC23Q5W5X9 447 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 OR4F3Q6IEY1 312 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 CCDC149Q6ZUS6 474 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 CALHM3Q86XJ0 350 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 ADHFE1Q8IWW8 467 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 L3MBTL4Q8NA19 623 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 CDC26Q8NHZ8 85 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 RDH12Q96NR8 316 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 MBOAT4Q96T53 435 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 OSBPL10Q9BXB5 764 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 CEP44Q9C0F1 390 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 ZBP1Q9H171 429 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 PRM3Q9NNZ6 103 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 HCFC1R1Q9NWW0 138 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 OR2AG2A6NM03 316 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 TMX2-CTNND1H3BSU7 103 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 MPC1LP0DKB6 136 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 CCL5P13501 91 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 PIGAP37287 484 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 PPP2R2BQ00005 443 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 PLEKHS1Q5SXH7 462 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 ANKRD34AQ69YU3 496 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 ZCCHC7Q8N3Z6 543 aaKnown RBP17.22■□□□□ 0.35
LRCH3-201ENST00000334859 OR52E4Q8NGH9 312 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 ZNF420Q8TAQ5 688 aaPredicted RBP17.22■□□□□ 0.35
LRCH3-201ENST00000334859 TESCQ96BS2 214 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 FANCEQ9HB96 536 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 FAM118AQ9NWS6 357 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 TMED5Q9Y3A6 229 aa17.22■□□□□ 0.35
LRCH3-201ENST00000334859 PRAMEF4O60810 478 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 NOL3O60936 208 aaKnown RBP17.21■□□□□ 0.35
LRCH3-201ENST00000334859 RECQL5O94762 991 aaPredicted RBP17.21■□□□□ 0.35
LRCH3-201ENST00000334859 ATE1O95260 518 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 DCKP27707 260 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 POLR2IP36954 125 aaKnown RBP17.21■□□□□ 0.35
LRCH3-201ENST00000334859 CCR2P41597 374 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 KIR3DL1P43629 444 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 AP1S2P56377 157 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 WDR5P61964 334 aaKnown RBP17.21■□□□□ 0.35
LRCH3-201ENST00000334859 DDX39BQ13838 428 aaKnown RBP17.21■□□□□ 0.35
LRCH3-201ENST00000334859 BROXQ5VW32 411 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 PRAMEF9Q5VWM5 478 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 CES5AQ6NT32 575 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 NOXRED1Q6NXP6 359 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 DOK6Q6PKX4 331 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 HSD11B1LQ7Z5J1 315 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 KREMEN2Q8NCW0 462 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms