RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 PGS1Q32NB8 556 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 FRG2Q64ET8 278 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 GALNT13Q8IUC8 556 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 DHRSXQ8N5I4 330 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 DDHD1Q8NEL9 900 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 TMBIM1Q969X1 311 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 MPP4Q96JB8 637 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 LRRC3BQ96PB8 259 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 FRG2BQ96QU4 278 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 EBPLQ9BY08 206 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 GORASP2Q9H8Y8 452 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 IL36AQ9UHA7 158 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 SLC8A2Q9UPR5 921 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 ELOVL7A1L3X0 281 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 SLC16A5O15375 505 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 ARHGEF15O94989 841 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 C7P10643 843 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 TCF3P15923 654 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 CD22P20273 847 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 CAPGP40121 348 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 CDKN2CP42773 168 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 IST1P53990 364 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 AP1S2P56377 157 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 DCDC1P59894 354 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 CCSMST1Q4G0I0 132 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 TCEAL5Q5H9L2 206 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 KIAA0907Q7Z7F0 614 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 PLPP6Q8IY26 295 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 RAVER1Q8IY67 606 aaKnown RBP14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 TRAM1L1Q8N609 369 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 RASGEF1AQ8N9B8 481 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 CMTM7Q96FZ5 175 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 KAT8Q9H7Z6 458 aaKnown RBP14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 VCX3AQ9NNX9 186 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 CEPT1Q9Y6K0 416 aa14.45□□□□□ -0.1
CLCNKA-201ENST00000331433 C16orf96A6NNT2 1141 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 CXCR6O00574 342 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 KPNA5O15131 536 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 DEAF1O75398 565 aaPredicted RBP14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 FGF19O95750 216 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 FGBP02675 491 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 CEBPBP17676 345 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 BMPR1AP36894 532 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 MTHFRP42898 656 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 ZIK1Q3SY52 487 aaPredicted RBP14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 SYTL3Q4VX76 610 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 ZNF805Q5CZA5 627 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 PRSS36Q5K4E3 855 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 AADATQ8N5Z0 425 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 ZNF557Q8N988 423 aaPredicted RBP14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 SPPL3Q8TCT6 385 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 HM13Q8TCT9 377 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 NCLNQ969V3 563 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 FAM162AQ96A26 154 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 ZSCAN5AQ9BUG6 496 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 C8orf4Q9NR00 106 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 GPRC5BQ9NZH0 403 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 SLCO2B1O94956 709 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 AP2A2O94973 939 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 FTH1P02794 183 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 PRPS2P11908 318 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 AMD1P17707 334 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 METAP1P53582 386 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 IRF8Q02556 426 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 MESP2Q0VG99 397 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 LAPTM5Q13571 262 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 DDX39BQ13838 428 aaKnown RBP14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 PLCL1Q15111 1095 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 ZNF284Q2VY69 593 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 B3GNT6Q6ZMB0 384 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 C12orf40Q86WS4 652 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 SH3GL1Q99961 368 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 WRAP53Q9BUR4 548 aaKnown RBP14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 PTTG2Q9NZH5 202 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 PCDHGA11Q9Y5H2 935 aa14.44□□□□□ -0.1
CLCNKA-201ENST00000331433 TSPAN11A1L157 253 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 E7EQ34 232 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 PER2O15055 1255 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 PRKD3O94806 890 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 C1QCP02747 245 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 GSTM1P09488 218 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 ELFN1P0C7U0 828 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 JUPP14923 745 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 CDH2P19022 906 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 MAP4P27816 1152 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 PBLDP30039 288 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 BDKRB1P46663 353 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 ALDH3B2P48448 385 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 ARSFP54793 590 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 GSTM4Q03013 218 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 ACOX1Q15067 660 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 DHCR24Q15392 516 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 KCTD21Q4G0X4 260 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 XKR6Q5GH73 641 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 OR4F3Q6IEY1 312 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 NOXRED1Q6NXP6 359 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 NEK10Q6ZWH5 1172 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 TECPR1Q7Z6L1 1165 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 STK32CQ86UX6 486 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms