RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CATSPERBQ9H7T0 1116 aa6.4□□□□□ -1.38
CSTF3-201ENST00000323959 XAB2Q9HCS7 855 aaKnown RBP6.4□□□□□ -1.38
CSTF3-201ENST00000323959 TMEM248Q9NWD8 314 aa6.4□□□□□ -1.38
CSTF3-201ENST00000323959 SENP1Q9P0U3 644 aa6.4□□□□□ -1.38
CSTF3-201ENST00000323959 ZNF212Q9UDV6 495 aa6.4□□□□□ -1.38
CSTF3-201ENST00000323959 ASIC3Q9UHC3 531 aa6.4□□□□□ -1.38
CSTF3-201ENST00000323959 A0A087WUV0 522 aaPredicted RBP6.4□□□□□ -1.39
CSTF3-201ENST00000323959 A0A087X1B8 175 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 OR5K4A6NMS3 321 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 E7EVH7 732 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 EEF2KO00418 725 aaKnown RBP6.4□□□□□ -1.39
CSTF3-201ENST00000323959 TEAD1P28347 426 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 KCNJ1P48048 391 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 MAPKAPK2P49137 400 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 CCNHP51946 323 aaPredicted RBP6.4□□□□□ -1.39
CSTF3-201ENST00000323959 PLTPP55058 493 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 ARL4CP56559 192 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 CTBSQ01459 385 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 LRP8Q14114 963 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 PLCL1Q15111 1095 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 ZSCAN26Q16670 478 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 PARP6Q2NL67 630 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 TTMPQ5BVD1 217 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 DENND2CQ68D51 928 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 TREML4Q6UXN2 200 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 RNF31Q96EP0 1072 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 CDC42EP4Q9H3Q1 356 aaKnown RBP6.4□□□□□ -1.39
CSTF3-201ENST00000323959 WDCPQ9H6R7 721 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 ESRP2Q9H6T0 727 aaKnown RBP6.4□□□□□ -1.39
CSTF3-201ENST00000323959 WDR26Q9H7D7 661 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 MRM3Q9HC36 420 aaKnown RBP6.4□□□□□ -1.39
CSTF3-201ENST00000323959 MKS1Q9NXB0 559 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 PCSK1NQ9UHG2 260 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 ZNF180Q9UJW8 692 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 TEX264Q9Y6I9 313 aa6.4□□□□□ -1.39
CSTF3-201ENST00000323959 KIR2DS5A0A0G2JLQ3 304 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 A0A0G2JNG1 304 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 MBD3L4A6NDZ8 208 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 MBD3L5A6NJ08 208 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 I6L893 689 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 KIR2DS3K7RE56 304 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 STK10O94804 968 aaKnown RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 HBQ1P09105 142 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 MYZAPP0CAP1 466 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 RHOQP17081 205 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 AGXTP21549 392 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 PSMA3P25788 255 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 SOX11P35716 441 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 ATP11AP98196 1134 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 SLC10A2Q12908 348 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 KIR2DS5Q14953 304 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 CCDC38Q502W7 563 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 DNAJC21Q5F1R6 531 aaKnown RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 KAZNQ674X7 775 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 KCTD11Q693B1 232 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 LRRC8BQ6P9F7 803 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 CCDC91Q7Z6B0 441 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 SRLQ86TD4 932 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 ZNF761Q86XN6 746 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 GSPT2Q8IYD1 628 aaKnown RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 MARVELD2Q8N4S9 558 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 RFLNBQ8N5W9 214 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 TEX26Q8N6G2 289 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 ATP6V0D2Q8N8Y2 350 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 TBC1D31Q96DN5 1066 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 BTN2A3PQ96KV6 586 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 ZNF599Q96NL3 588 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 TGM7Q96PF1 710 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 DPH5Q9H2P9 285 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 DHX35Q9H5Z1 703 aaKnown RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 SYTL2Q9HCH5 934 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 SLC6A20Q9NP91 592 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 PHPT1Q9NRX4 125 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 ETNK2Q9NVF9 386 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 KCTD5Q9NXV2 234 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 NINJ2Q9NZG7 142 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 PTGFRNQ9P2B2 879 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 MRPS2Q9Y399 296 aaKnown RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.39□□□□□ -1.392e-8■■■■■ 31.6
CSTF3-201ENST00000323959 GSRP00390 522 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 APOEP02649 317 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 C1QAP02745 245 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 ARAFP10398 606 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 AK4P27144 223 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 ETV3P41162 512 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 ACTR1BP42025 376 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 SSR1P43307 286 aaKnown RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 MAGEA4P43358 317 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 GDF10P55107 478 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 YBEYP58557 167 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 ACTR1AP61163 376 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 MMRN1Q13201 1228 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 RAB6CQ53S08 254 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 C10orf62Q5T681 223 aaPredicted RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 CARFQ8N187 725 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 MEIOBQ8N635 442 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 RTL3Q8N8U3 475 aaKnown RBP6.39□□□□□ -1.39
CSTF3-201ENST00000323959 OR2Y1Q8NGV0 311 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 FAM57AQ8TBR7 257 aa6.39□□□□□ -1.39
CSTF3-201ENST00000323959 RAB6CQ9H0N0 254 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms