RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 ASF1AQ9Y294 204 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 TMED5Q9Y3A6 229 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 ST14Q9Y5Y6 855 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 PIPSLA2A3N6 862 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 ELFN1P0C7U0 828 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 PRSS56P0CW18 603 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 NTSP30990 170 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 HNF4AP41235 474 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 DUOXA1Q1HG43 343 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 RAET1GQ6H3X3 334 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 FAM92BQ6ZTR7 304 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 LRRC70Q7Z2Q7 622 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 GPR65Q8IYL9 337 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 CDK20Q8IZL9 346 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 OR10G2Q8NGC3 310 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 UBXN10Q96LJ8 280 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 SLC38A2Q96QD8 506 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 C11orf84Q9BUA3 381 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-201ENST00000323668 ASAH2Q9NR71 780 aa14.4□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF282Q9UDV7 671 aaPredicted RBP14.4□□□□□ -0.1
TCOF1-201ENST00000323668 MTMR11A4FU01 709 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 UNCXA6NJT0 531 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 GRM6O15303 877 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 LDB2O43679 373 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 RFX3P48380 749 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 RCAN2Q14206 197 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 DSC3Q14574 896 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 HSF5Q4G112 596 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-201ENST00000323668 CCDC149Q6ZUS6 474 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 PLEKHM3Q6ZWE6 761 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 MTSS1LQ765P7 747 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 NANOGNBQ7Z5D8 188 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 RETREG3Q86VR2 466 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 CAMKK1Q8N5S9 505 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 C1GALT1C1Q96EU7 318 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 NPLQ9BXD5 320 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-201ENST00000323668 CSNK1G1Q9HCP0 422 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 ENTPD4Q9Y227 616 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 LOXHD1Q8IVV2 1947 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 GABBR2O75899 941 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 ALDOCP09972 364 aaKnown RBP14.39□□□□□ -0.11
TCOF1-201ENST00000323668 RAB14P61106 215 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 VBP1P61758 197 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 SEMA3BQ13214 749 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 ABRAXAS2Q15018 415 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 PTCHD3Q3KNS1 767 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 CHCHD4Q8N4Q1 142 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 ZNF614Q8N883 585 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 AP3S1Q92572 193 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 ZNF221Q9UK13 617 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 STRCQ7RTU9 1775 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 GUCY1B2O75343 617 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 CCNB2O95067 398 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 PCDH8O95206 1070 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 MAPK9P45984 424 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 IST1P53990 364 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 AP1S2P56377 157 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 TUBA1BP68363 451 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 KIAA1614Q5VZ46 1190 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 RNF19BQ6ZMZ0 732 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 TUBA1AQ71U36 451 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 RAB43Q86YS6 212 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 ITPAQ9BY32 194 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 KCNH6Q9H252 994 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 THUMPD1Q9NXG2 353 aaKnown RBP14.39□□□□□ -0.11
TCOF1-201ENST00000323668 FZD4Q9ULV1 537 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-201ENST00000323668 TNNI3P19429 210 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 GSTM2P28161 218 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 ERVPABLB-1P60509 514 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 SLC36A3Q495N2 470 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 FAM131AQ6UXB0 335 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 SERINC5Q86VE9 423 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 NPAS4Q8IUM7 802 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 DTWD1Q8N5C7 304 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 C3orf58Q8NDZ4 430 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 GPR150Q8NGU9 434 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 CNIH3Q8TBE1 160 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 MAELQ96JY0 434 aaKnown RBP14.39□□□□□ -0.11
TCOF1-201ENST00000323668 SLC30A3Q99726 388 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 FUNDC2Q9BWH2 189 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 FLRT1Q9NZU1 646 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 SEC14L3Q9UDX4 400 aa14.39□□□□□ -0.11
TCOF1-201ENST00000323668 PSMD11O00231 422 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 SLC28A2O43868 658 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 GADD45GO95257 159 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 C9P02748 559 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 SPATA31D3P0C874 917 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 GGT1P19440 569 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 ARRB2P32121 409 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 TIE1P35590 1138 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 HTR6P50406 440 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 ZFP69Q49AA0 526 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 BHLHB9Q6PI77 547 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 TMPRSS11AQ6ZMR5 421 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 SPATA31D4Q6ZUB0 917 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 CHST9Q7L1S5 443 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 KCNC2Q96PR1 638 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 OLAHQ9NV23 265 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 ATP6V1HQ9UI12 483 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms