RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 hCG_2039718K7EN88 272 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 SOCS5O75159 536 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 XYLBO75191 536 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 CPSF4O95639 269 aaKnown RBP16.95■□□□□ 0.3
COL9A1-201ENST00000320755 MYBPC3Q14896 1274 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 XAF1Q6GPH4 301 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 ZNF621Q6ZSS3 439 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 USP45Q70EL2 814 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 SPARTQ8N0X7 666 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 OR7A2PQ8NGA2 310 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 OR13F1Q8NGS4 319 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 CNIH3Q8TBE1 160 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 SCRN2Q96FV2 425 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 MYOCQ99972 504 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 LOC100130705A0A1B0GUX0 176 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 OR2AG2A6NM03 316 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 ZNF701M0R085 212 aaPredicted RBP16.95■□□□□ 0.3
COL9A1-201ENST00000320755 TEX28O15482 410 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 PRAMEF4O60810 478 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 OR56A5P0C7T3 313 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 CLDN8P56748 225 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 IL5RAQ01344 420 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 PRAMEF9Q5VWM5 478 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 CHST14Q8NCH0 376 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 NRBF2Q96F24 287 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 ZNF558Q96NG5 402 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 CREBZFQ9NS37 354 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 VNN3Q9NY84 501 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 SNX6Q9UNH7 406 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 C16orf96A6NNT2 1141 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 ABCB7O75027 752 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 EFEMP2O95967 443 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 HLA-FP30511 346 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 PPP3CCP48454 512 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 NFATC3Q12968 1075 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 CHIT1Q13231 466 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 NOGQ13253 232 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 Q6ZVU0 165 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 GPR149Q86SP6 731 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 RNF168Q8IYW5 571 aaPredicted RBP16.95■□□□□ 0.3
COL9A1-201ENST00000320755 TBC1D15Q8TC07 691 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 DPH2Q9BQC3 489 aaPredicted RBP16.95■□□□□ 0.3
COL9A1-201ENST00000320755 CPPED1Q9BRF8 314 aaPredicted RBP16.95■□□□□ 0.3
COL9A1-201ENST00000320755 RIBC2Q9H4K1 309 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 RMND5AQ9H871 391 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 BRD9Q9H8M2 597 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 RDH14Q9HBH5 336 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 B4GALT6Q9UBX8 382 aa16.95■□□□□ 0.3
COL9A1-201ENST00000320755 ERN1O75460 977 aaKnown RBP16.94■□□□□ 0.3
COL9A1-201ENST00000320755 FSHRP23945 695 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 MAPK8P45983 427 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 PLA2G16P53816 162 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 ABRQ12979 859 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 RAB33AQ14088 237 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 ZNF551Q7Z340 670 aaPredicted RBP16.94■□□□□ 0.3
COL9A1-201ENST00000320755 ZDHHC21Q8IVQ6 265 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 ARL10Q8N8L6 244 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 FNDC8Q8TC99 324 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 UBTD2Q8WUN7 234 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 DEFB118Q96PH6 123 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 KCNH6Q9H252 994 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 ORC6Q9Y5N6 252 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 MPPE1Q53F39 396 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 CYP2U1Q7Z449 544 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 PXYLP1Q8TE99 480 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 TANKQ92844 425 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 PYURFQ96I23 114 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 PANX1Q96RD7 426 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 SLC29A3Q9BZD2 475 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 PCDH12Q9NPG4 1184 aa16.94■□□□□ 0.3
COL9A1-201ENST00000320755 BCL10O95999 233 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 HTR1AP08908 422 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 TBC1D25Q3MII6 688 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 ATG9BQ674R7 924 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 C16orf87Q6PH81 154 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 DHRS4L2Q6PKH6 230 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 VTCN1Q7Z7D3 282 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 OR5K1Q8NHB7 308 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 GIPC3Q8TF64 312 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 ELMO1Q92556 727 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 CSF3RQ99062 836 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 C3orf18Q9UK00 162 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 TMPRSS11EQ9UL52 423 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 CDH7Q9ULB5 785 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 ABCG2Q9UNQ0 655 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 GOLGA4Q13439 2230 aaKnown RBP16.93■□□□□ 0.3
COL9A1-201ENST00000320755 TRBV5-3A0A0A0MS03 114 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 GFRA2O00451 464 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 FKBP9O95302 570 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 HNRNPCP07910 306 aaKnown RBP eCLIP16.93■□□□□ 0.3
COL9A1-201ENST00000320755 AOAHP28039 575 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 PSMD7P51665 324 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 FOXD4Q12950 439 aaPredicted RBP16.93■□□□□ 0.3
COL9A1-201ENST00000320755 TSTA3Q13630 321 aaPredicted RBP16.93■□□□□ 0.3
COL9A1-201ENST00000320755 DUS1LQ6P1R4 473 aaKnown RBP16.93■□□□□ 0.3
COL9A1-201ENST00000320755 FKBP9P1Q75LS8 142 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 DCP2Q8IU60 420 aaKnown RBP16.93■□□□□ 0.3
COL9A1-201ENST00000320755 SYT12Q8IV01 421 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 SVOPLQ8N434 492 aa16.93■□□□□ 0.3
COL9A1-201ENST00000320755 FIBINQ8TAL6 211 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms