RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 CCDC90BQ9GZT6 254 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 TRPV5Q9NQA5 729 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 MBD1Q9UIS9 605 aaPredicted RBP15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 PDE10AQ9Y233 779 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 CHD9Q3L8U1 2897 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 GLYATL1P3A0A0U1RQE8 302 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 LRG1P02750 347 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 ITGALP20701 1170 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 ALDH3A2P51648 485 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 POLR2JP52435 117 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 RPL38P63173 70 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 CD47Q08722 323 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 DAG1Q14118 895 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 RFTN2Q52LD8 501 aaPredicted RBP15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 RBM48Q5RL73 367 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 PRMT9Q6P2P2 845 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 MILR1Q7Z6M3 343 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 RIMKLAQ8IXN7 391 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 OVCA2Q8WZ82 227 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 ALG14Q96F25 216 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 CEP44Q9C0F1 390 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 TRIT1Q9H3H1 467 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 MTG2Q9H4K7 406 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 HPS4Q9NQG7 708 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 C8orf4Q9NR00 106 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 MRGBPQ9NV56 204 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 ELOVL2Q9NXB9 296 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 PCDHGA3Q9Y5H0 932 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 A0A1W2PQ67 120 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 NDUFS2O75306 463 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 KCNK2O95069 426 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 SPNP16150 400 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 CPSF6Q16630 551 aaKnown RBP eCLIP15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 AP5B1Q2VPB7 878 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 SBSNQ6UWP8 590 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 C8orf59Q8N0T1 100 aaPredicted RBP15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 GPR26Q8NDV2 337 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 OR6Q1Q8NGQ2 317 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 PSMA8Q8TAA3 256 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 MAGED4Q96JG8 741 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 BDH2Q9BUT1 245 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 FAM118AQ9NWS6 357 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 THG1LQ9NWX6 298 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 AASSQ9UDR5 926 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 DHRS7Q9Y394 339 aa15.18■□□□□ 0.02
SHROOM1-201ENST00000319854 NEDD8-MDP1E9PL57 170 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 GAPDHSO14556 408 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 GREM1O60565 184 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 SH3BGRLO75368 114 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 TRBC1P01850 177 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 RAB33AQ14088 237 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 INO80DQ53TQ3 878 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 ZNF697Q5TEC3 545 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 PTRH1Q86Y79 214 aaKnown RBP15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 DCAF4L2Q8NA75 395 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 OR7A2PQ8NGA2 310 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 GLMNQ92990 594 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 ZNF486Q96H40 463 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 ITCHQ96J02 903 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 RIMKLBQ9ULI2 386 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 XPNPEP2O43895 674 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 RFPL2O75678 378 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 CXCL10P02778 98 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 BOP1Q14137 746 aaKnown RBP15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 LRRC66Q68CR7 880 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 TMEM25Q86YD3 366 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 ARMC8Q8IUR7 673 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 SLC22A15Q8IZD6 547 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 S100ZQ8WXG8 99 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 HDAC2Q92769 488 aaKnown RBP15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 VWCEQ96DN2 955 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 CLIP3Q96DZ5 547 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 MBOAT4Q96T53 435 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 MARCH7Q9H992 704 aa15.17■□□□□ 0.02
SHROOM1-201ENST00000319854 OR7A17O14581 309 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 FZD6O60353 706 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 NAT1P18440 290 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 SEPHS1P49903 392 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 NCS1P62166 190 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 EMX1Q04741 257 aaPredicted RBP15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 PLEKHG6Q3KR16 790 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 ZNF648Q5T619 568 aaPredicted RBP15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 Q6ZVU0 165 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 AKAP14Q86UN6 197 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 TCEAL4Q96EI5 215 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 P2RY12Q9H244 342 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 CARS2Q9HA77 564 aaKnown RBP15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 ABCB10Q9NRK6 738 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 AIG1Q9NVV5 245 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 UTS2RQ9UKP6 389 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 TTC34A8MYJ7 566 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 UPK3BL1B0FP48 263 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 UPK3BL2E5RIL1 263 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 M0R3G1 203 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 NUAK1O60285 661 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 C8AP07357 584 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 CD40LGP29965 261 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 MAP2K4P45985 399 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 LAPTM5Q13571 262 aa15.16■□□□□ 0.02
SHROOM1-201ENST00000319854 HIST2H2ACQ16777 129 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms