RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 FAIM2Q9BWQ8 316 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 LRRN3Q9H3W5 708 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 GPRC5CQ9NQ84 441 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 PDP1Q9P0J1 537 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 CRLS1Q9UJA2 301 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 RIMS3Q9UJD0 308 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 RIMKLBQ9ULI2 386 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 TNFSF13BQ9Y275 285 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 NUBP2Q9Y5Y2 271 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 M0R2N6 131 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 CA12O43570 354 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ZMPSTE24O75844 475 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 PIGRP01833 764 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 GNAO1P09471 354 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 SUPT20HL2P0C7V6 817 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 HSD3B1P14060 373 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 CHRNB2P17787 502 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 HSD3B2P26439 372 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 SLC5A2P31639 672 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 DGKQP52824 942 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 INHBCP55103 352 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 MCCD1P59942 119 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 DSTNP60981 165 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 BTG1P62324 171 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 SF3A2Q15428 464 aaKnown RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 PARP15Q460N3 678 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 EIPR1Q53HC9 387 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 IL31Q6EBC2 164 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 LPCAT3Q6P1A2 487 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 GID4Q8IVV7 300 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 TOMM5Q8N4H5 51 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ATAD1Q8NBU5 361 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 TWIST2Q8WVJ9 160 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 KCNN1Q92952 543 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 EPYCQ99645 322 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 TLR8Q9NR97 1041 aaKnown RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 PACSIN3Q9UKS6 424 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 MGAT4AQ9UM21 535 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 COG5Q9UP83 839 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 OR6C70A6NIJ9 312 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 RFXANKO14593 260 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ESR1P03372 595 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ACADMP11310 421 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 SLC2A4P14672 509 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 RAB4AP20338 218 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 RBMS1P29558 406 aaKnown RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 GLRBP48167 497 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 CLK2P49760 499 aaKnown RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 RAP2BP61225 183 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ZNF311Q5JNZ3 666 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 CPTPQ5TA50 214 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 SWSAP1Q6NVH7 229 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 KLHL24Q6TFL4 600 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 MOB2Q70IA6 237 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 RNF130Q86XS8 419 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 EFCAB3Q8N7B9 438 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 NEUROD4Q9HD90 331 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 HEBP1Q9NRV9 189 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 PAQR5Q9NXK6 330 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 SCP2D1Q9UJQ7 156 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ZNF112Q9UJU3 913 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 LSM7Q9UK45 103 aaKnown RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 DYRK1BQ9Y463 629 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 DGKBQ9Y6T7 804 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 PHIPQ8WWQ0 1821 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 TGFB1I1O43294 461 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 MITFO75030 526 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 STAU1O95793 577 aaKnown RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 CBSLP0DN79 551 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 PRPS1L1P21108 318 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ENDOUP21128 410 aaKnown RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 CBSP35520 551 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ETV4P43268 484 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 SLC11A2P49281 568 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 TARDBPQ13148 414 aaKnown RBP eCLIP4.42□□□□□ -1.79e-7■■■■□ 21.6
CNOT1-201ENST00000317147 PCLAFQ15004 111 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 SPIN4Q56A73 249 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 METTL11BQ5VVY1 283 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 KLHL36Q8N4N3 616 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 PTGR2Q8N8N7 351 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 MYRFLQ96LU7 910 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 DOK1Q99704 481 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ZSCAN5AQ9BUG6 496 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 TCF7L1Q9HCS4 588 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ACOT13Q9NPJ3 140 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 INPP5EQ9NRR6 644 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 SEMA3GQ9NS98 782 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 DDIT4Q9NX09 232 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ZNF175Q9Y473 711 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 F8VP50 259 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 CREBL2O60519 120 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-201ENST00000317147 BANF1O75531 89 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 CSF3P09919 207 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 ERVK-10P10266 1014 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 CHRM3P20309 590 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 VEGFCP49767 419 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 PTSQ03393 145 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 EMX2Q04743 252 aa4.42□□□□□ -1.7
CNOT1-201ENST00000317147 FBXO47Q5MNV8 452 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms