RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 HTR3DQ70Z44 454 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 LPCAT1Q8NF37 534 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 PSMA8Q8TAA3 256 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 STAG3L4Q8TBR4 150 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 MCOLN3Q8TDD5 553 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 HTRA1Q92743 480 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 ITCHQ96J02 903 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 TRIB3Q96RU7 358 aa16.79■□□□□ 0.28
SCAMP4-201ENST00000316097 CARNS1A5YM72 827 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 GSTA4O15217 222 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 CD3EAPO15446 510 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 PRAMEF12O95522 483 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 NPPAP01160 153 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 UROSP10746 265 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 TCEA1P23193 301 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 CTSOP43234 321 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 AAK1Q2M2I8 961 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 CATSPEREQ5SY80 951 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 ZNF691Q5VV52 312 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 THOC7Q6I9Y2 204 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 LINC00299Q6ZSB3 139 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 TMEM25Q86YD3 366 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 MDGA1Q8NFP4 955 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 SLC47A1Q96FL8 570 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 ERVK-18Q9QC07 812 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 RAI2Q9Y5P3 530 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 OBSL1O75147 1896 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 UBA6A0AVT1 1052 aaPredicted RBP16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 BNIP3LO60238 219 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 RPS17P08708 135 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 PBX2P40425 430 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 HNRNPFP52597 415 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 LMAN2Q12907 356 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 PAQR3Q6TCH7 311 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 ADGRD2Q7Z7M1 963 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 P2RY8Q86VZ1 359 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 DPP10Q8N608 796 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 C17orf50Q8WW18 174 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 KIAA1191Q96A73 305 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 HBEGFQ99075 208 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 NUSAP1Q9BXS6 441 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 TNKS2Q9H2K2 1166 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 NECTIN3Q9NQS3 549 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 C3orf18Q9UK00 162 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 INTS6Q9UL03 887 aaKnown RBP16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 INVSQ9Y283 1065 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 CHD5Q8TDI0 1954 aa16.78■□□□□ 0.28
SCAMP4-201ENST00000316097 CDC7O00311 574 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 CD40LGP29965 261 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 SUOXP51687 545 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 CYP2U1Q7Z449 544 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 TMEM179BQ7Z7N9 219 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 ARMC8Q8IUR7 673 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 EFHBQ8N7U6 833 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 CDYL2Q8N8U2 506 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 DYNC2LI1Q8TCX1 351 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 ZNF583Q96ND8 569 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 DACH2Q96NX9 599 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 ACTR8Q9H981 624 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 BPIFA1Q9NP55 256 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 ABCB10Q9NRK6 738 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 USE1Q9NZ43 259 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 GALPQ9UBC7 116 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 AASSQ9UDR5 926 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 KLHL3Q9UH77 587 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 ADGRE2Q9UHX3 823 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 TMEM98Q9Y2Y6 226 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 U3KQV3 271 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 SPTBN5Q9NRC6 3674 aaKnown RBP16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 MYOFQ9NZM1 2061 aa16.77■□□□□ 0.28
SCAMP4-201ENST00000316097 PSMD11O00231 422 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 ANGPTL1O95841 491 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 PTPN2P17706 415 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 PSMB9P28065 219 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 FMO3P31513 532 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 STK19P49842 368 aaPredicted RBP16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 NKX2-5P52952 324 aaPredicted RBP16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 RHOAP61586 193 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 CDK5R2Q13319 367 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 ATAD3BQ5T9A4 648 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 ALG1LQ6GMV1 187 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 MRNIPQ6NTE8 343 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 PAGE2Q7Z2X7 111 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 SVOPLQ8N434 492 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 Q8N9G6 341 aaPredicted RBP16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 OR2T12Q8NG77 320 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 PHOSPHO2Q8TCD6 241 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 AARSD1Q9BTE6 412 aaKnown RBP16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 LHX3Q9UBR4 397 aa16.77■□□□□ 0.27
SCAMP4-201ENST00000316097 NPEPPSL1A6NEC2 478 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 TTC34A8MYJ7 566 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 FAM47E-STBD1D6RA91 191 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 RHOBTB1O94844 696 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 OR4F21O95013 312 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 NDST3O95803 873 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 ARL1P40616 181 aaPredicted RBP16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 EFL1Q7Z2Z2 1120 aaKnown RBP16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 CDK15Q96Q40 435 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 BTBD2Q9BX70 525 aa16.76■□□□□ 0.27
SCAMP4-201ENST00000316097 ABCB8Q9NUT2 735 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms