RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 MYRFQ9Y2G1 1151 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 PKP3Q9Y446 797 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 V9GYH0 126 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 A0A1W2PPW3 197 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 NUAK1O60285 661 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 AMD1P17707 334 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 PCSK1P29120 753 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 EEF1DP29692 281 aaKnown RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 RPS9P46781 194 aaKnown RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 POLR2JP52435 117 aaKnown RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 ATN1P54259 1190 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CDH4P55283 916 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 ZNF33BQ06732 778 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 SKIV2LQ15477 1246 aaKnown RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CD200R1LQ6Q8B3 271 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 DHFR2Q86XF0 187 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 TBC1D21Q8IYX1 336 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CPXM2Q8N436 756 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 BEND7Q8N7W2 519 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 SIDT2Q8NBJ9 832 aaKnown RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 ABHD11Q8NFV4 315 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 TMBIM1Q969X1 311 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CNBD2Q96M20 576 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 FUNDC2Q9BWH2 189 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 ZNF334Q9HCZ1 680 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 DZANK1Q9NVP4 752 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 TCEAL9Q9UHQ7 104 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 SH2B3Q9UQQ2 575 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 FAM149AA5PLN7 773 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 PROB1E7EW31 1015 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 H3BQ06 376 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 GRM6O15303 877 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CLOCKO15516 846 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 RAP2AP10114 183 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 BMP4P12644 408 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 ITGB7P26010 798 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 PPM1AP35813 382 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 IST1P53990 364 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CDH13P55290 713 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CLDN8P56748 225 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 SNRPNP63162 240 aaKnown RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 ACOX1Q15067 660 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 DGKKQ5KSL6 1271 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 RARS2Q5T160 578 aaKnown RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 NEK10Q6ZWH5 1172 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CBLL1Q75N03 491 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 TECPR1Q7Z6L1 1165 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 RAVER1Q8IY67 606 aaKnown RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 PTGR2Q8N8N7 351 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 GALNT6Q8NCL4 622 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 OR6Q1Q8NGQ2 317 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CDADC1Q9BWV3 514 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CD244Q9BZW8 370 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 UNKQ9C0B0 810 aaKnown RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 ATXN3LQ9H3M9 355 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 TOR3AQ9H497 397 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 TBC1D24Q9ULP9 559 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 INVSQ9Y283 1065 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 TRPM6Q9BX84 2022 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 A0A096LPI6 279 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 ATP6AP2A0A1C7CYW4 349 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 HYAL3O43820 417 aaPredicted RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 SYNCRIPO60506 623 aaKnown RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 NIPSNAP2O75323 286 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 ATP6AP2O75787 350 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 LYPD3O95274 346 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 SDC1P18827 310 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CCR7P32248 378 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 TGFBR1P36897 503 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CCL23P55773 120 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 VLDLRP98155 873 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 DAG1Q14118 895 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 FAM83EQ2M2I3 478 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 AGKQ53H12 422 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 MPP7Q5T2T1 576 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 CYP20A1Q6UW02 462 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 KDELC2Q7Z4H8 507 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 SERHL2Q9H4I8 314 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 MAN2C1Q9NTJ4 1040 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 OBP2AQ9NY56 170 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 NUDT4Q9NZJ9 180 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 TESQ9UGI8 421 aaKnown RBP7.61□□□□□ -1.19
CNOT4-201ENST00000315544 BLOC1S6Q9UL45 172 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 ICKQ9UPZ9 632 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 LIPT1Q9Y234 373 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 HS3ST2Q9Y278 367 aa7.61□□□□□ -1.19
CNOT4-201ENST00000315544 NEMP1O14524 444 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 LINC00032P0C843 101 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 SLC2A3P11169 496 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 NCK1P16333 377 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 BPIP17213 487 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 PSMC3P17980 439 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 TSPAN8P19075 237 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 CSRP1P21291 193 aaKnown RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 OPRL1P41146 370 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 SSR1P43307 286 aaKnown RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 ERVFC1P60507 584 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 PDAP1Q13442 181 aaKnown RBP7.6□□□□□ -1.19
CNOT4-201ENST00000315544 GTDC1Q4AE62 458 aa7.6□□□□□ -1.19
CNOT4-201ENST00000315544 KCTD8Q6ZWB6 473 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms