RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PTSQ03393 145 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 GANABQ14697 944 aaKnown RBP12.98□□□□□ -0.33
DDX54-201ENST00000306014 ABRAXAS2Q15018 415 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 ADGRF1Q5T601 910 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 CAPN13Q6MZZ7 669 aaPredicted RBP12.98□□□□□ -0.33
DDX54-201ENST00000306014 BORAQ6PGQ7 559 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 PLET1Q6UQ28 207 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 USP43Q70EL4 1123 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 SLC32A1Q9H598 525 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 THUMPD1Q9NXG2 353 aaKnown RBP12.98□□□□□ -0.33
DDX54-201ENST00000306014 SPATA2Q9UM82 520 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 CNMDO75829 334 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 SNX4O95219 450 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 CHRM1P11229 460 aaPredicted RBP12.98□□□□□ -0.33
DDX54-201ENST00000306014 FPR1P21462 350 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 CSKP41240 450 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 GPR1P46091 355 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 LRRTM3Q86VH5 581 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 RETREG3Q86VR2 466 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 TMEM125Q96AQ2 219 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 LHPPQ9H008 270 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 FAM83DQ9H4H8 585 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 AGPAT4Q9NRZ5 378 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 ERVK-18Q9QC07 812 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 SEC14L3Q9UDX4 400 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 FZD4Q9ULV1 537 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 H3BM21 787 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 QSOX1O00391 747 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 PLOD2O00469 737 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 HAT1O14929 419 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 SERPINB7O75635 380 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 EIF2S1P05198 315 aaKnown RBP12.97□□□□□ -0.33
DDX54-201ENST00000306014 ARRB2P32121 409 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 INHBCP55103 352 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 SMIM11AP58511 58 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 IL18R1Q13478 541 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 HKDC1Q2TB90 917 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 GPAT3Q53EU6 434 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 TPRG1LQ5T0D9 272 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 FRG2Q64ET8 278 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ARHGAP12Q8IWW6 846 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 YAF2Q8IY57 180 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 RGL4Q8IZJ4 473 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 FBXO22Q8NEZ5 403 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 OR8J3Q8NGG0 315 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 XAGE5Q8WWM1 108 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 COL26A1Q96A83 441 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 FUBP1Q96AE4 644 aaKnown RBP12.97□□□□□ -0.33
DDX54-201ENST00000306014 RDH12Q96NR8 316 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 FRG2BQ96QU4 278 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 SLC9A8Q9Y2E8 581 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 MAGED1Q9Y5V3 778 aaPredicted RBP12.97□□□□□ -0.33
DDX54-201ENST00000306014 ACOT8O14734 319 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 CASKO14936 926 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 MATN4O95460 622 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 CLTBP09497 229 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ALDOCP09972 364 aaKnown RBP12.97□□□□□ -0.33
DDX54-201ENST00000306014 APLP1P51693 650 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 CSNK2BP67870 215 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 MVKQ03426 396 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 TEAD4Q15561 434 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 NDUFA5Q16718 116 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ZSWIM7Q19AV6 140 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 DPY19L1Q2PZI1 675 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 KCTD11Q693B1 232 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 CDC73Q6P1J9 531 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.97□□□□□ -0.33
DDX54-201ENST00000306014 MTSS1LQ765P7 747 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ZFAND4Q86XD8 727 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 DTWD1Q8N5C7 304 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 TRUB1Q8WWH5 349 aaKnown RBP12.97□□□□□ -0.33
DDX54-201ENST00000306014 HSH2DQ96JZ2 352 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 QRFPRQ96P65 431 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 SLC30A3Q99726 388 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ITPAQ9BY32 194 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 SNTG1Q9NSN8 517 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 TREX1Q9NSU2 369 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 PTGFRNQ9P2B2 879 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 CPQQ9Y646 472 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 GADD45GO95257 159 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ATE1O95260 518 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 BMXP51813 675 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 AFF1P51825 1210 aaKnown RBP12.97□□□□□ -0.33
DDX54-201ENST00000306014 GRIK2Q13002 908 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ZNF404Q494X3 552 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 MARCH8Q5T0T0 291 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 C6orf183Q5T699 404 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 CES4AQ5XG92 561 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 NUDT18Q6ZVK8 323 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 NCCRP1Q6ZVX7 275 aaPredicted RBP12.97□□□□□ -0.33
DDX54-201ENST00000306014 PAQR9Q6ZVX9 377 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 LGI4Q8N135 537 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 TEFMQ96QE5 360 aaKnown RBP12.97□□□□□ -0.33
DDX54-201ENST00000306014 IL4I1Q96RQ9 567 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ITM2CQ9NQX7 267 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 KRT87PA6NCN2 255 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 SAP18O00422 153 aaKnown RBP12.97□□□□□ -0.33
DDX54-201ENST00000306014 CCNB2O95067 398 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 C8GP07360 202 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ELFN1P0C7U0 828 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms