RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 MAN2B2Q9Y2E5 1009 aa25.44■■□□□ 1.66
CDKN2A-201ENST00000304494 COL6A6A6NMZ7 2263 aa25.44■■□□□ 1.66
CDKN2A-201ENST00000304494 C9J4A7 227 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 HCRTR1O43613 425 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 PRICKLE3O43900 615 aaPredicted RBP25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 PSIP1O75475 530 aaKnown RBP25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 CATP04040 527 aaKnown RBP25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 IVDP26440 423 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 CYP2A13Q16696 494 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 PTCHD3Q3KNS1 767 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 LCN10Q6JVE6 187 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 RHBDD2Q6NTF9 364 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 ZNF549Q6P9A3 640 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 PDIK1LQ8N165 341 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 C9orf43Q8TAL5 461 aaPredicted RBP25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 PROKR1Q8TCW9 393 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 DENND1AQ8TEH3 1009 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 ZUFSPQ96AP4 578 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 IARS2Q9NSE4 1012 aaKnown RBP25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 EURLQ9NYK6 297 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 KLHL20Q9Y2M5 609 aa25.43■■□□□ 1.66
CDKN2A-201ENST00000304494 FASNP49327 2511 aaKnown RBP25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 TARM1B6A8C7 271 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 ENO3P13929 434 aaPredicted RBP25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 BBS9Q3SYG4 887 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 FIGLAQ6QHK4 219 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 FAM198BQ6UWH4 519 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 OR9A1PQ8NGU1 263 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 INPP5DQ92835 1189 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 NDC1Q9BTX1 674 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 DHRS4Q9BTZ2 278 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 TXLNGQ9NUQ3 528 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 TCFL5Q9UL49 500 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 PADI2Q9Y2J8 665 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 DHRS7Q9Y394 339 aa25.42■■□□□ 1.66
CDKN2A-201ENST00000304494 ARHGEF33A8MVX0 844 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 MYO1CO00159 1063 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 SLC28A2O43868 658 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 VPS26AO75436 327 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 HAUS5O94927 633 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 F7P08709 466 aaPredicted RBP25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 CBSLP0DN79 551 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 CBSP35520 551 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 HSD17B2P37059 387 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 PMS2P54278 862 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 MPP1Q00013 466 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 IL10RAQ13651 578 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 ARHGAP19Q14CB8 494 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 NAA25Q14CX7 972 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 NCF4Q15080 339 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 MSS51Q4VC12 460 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 ZNF385CQ66K41 422 aaPredicted RBP25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 PRICKLE2Q7Z3G6 844 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 MCATQ8IVS2 390 aaKnown RBP25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 APLFQ8IW19 511 aaPredicted RBP25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 ZNF655Q8N720 491 aaPredicted RBP25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 C2CD4AQ8NCU7 369 aaPredicted RBP25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 GIMAP7Q8NHV1 300 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 SLC30A3Q99726 388 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 MED16Q9Y2X0 877 aa25.41■■□□□ 1.66
CDKN2A-201ENST00000304494 KRT87PA6NCN2 255 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 ZNF839A8K0R7 811 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 MKRN2OSH3BPM6 223 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 BANF1O75531 89 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 RFPL1O75677 317 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 CAPN1P07384 714 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 CD63P08962 238 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 MPC1LP0DKB6 136 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 ERVK-10P10266 1014 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 ERGP11308 486 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 GRIA3P42263 894 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 CUL1Q13616 776 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 FCRL6Q6DN72 434 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 UGT3A1Q6NUS8 523 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 HIBCHQ6NVY1 386 aaPredicted RBP25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 OR2L3Q8NG85 312 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 DLG3Q92796 817 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 LRRC39Q96DD0 335 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 ABHD17AQ96GS6 310 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 SNF8Q96H20 258 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 GPR21Q99679 349 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 MIPEPQ99797 713 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 AARSD1Q9BTE6 412 aaKnown RBP25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 KLK4Q9Y5K2 254 aa25.4■■□□□ 1.66
CDKN2A-201ENST00000304494 ZNF462Q96JM2 2506 aa25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 J3QKU1 62 aa25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 EIF3FO00303 357 aaPredicted RBP25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 TTI1O43156 1089 aa25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 PSMB5P28074 263 aa25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 ARSFP54793 590 aa25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 DCDP81605 110 aaKnown RBP25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 TCTE1Q5JU00 501 aa25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 KIAA0408Q6ZU52 694 aa25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 FBXO15Q8NCQ5 510 aaPredicted RBP25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 OR2A1Q8NGT9 310 aa25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 CD200R1Q8TD46 325 aa25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 SMPDL3AQ92484 453 aa25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 GBP5Q96PP8 586 aa25.39■■□□□ 1.66
CDKN2A-201ENST00000304494 GPN3Q9UHW5 284 aaPredicted RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms