RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 TMEM248Q9NWD8 314 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 POP7O75817 140 aaKnown RBP20.31■□□□□ 0.84
LTBP3-201ENST00000301873 MATN4O95460 622 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 PRKACGP22612 351 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 HOXA11P31270 313 aaPredicted RBP20.31■□□□□ 0.84
LTBP3-201ENST00000301873 ZNF155Q12901 538 aaPredicted RBP20.31■□□□□ 0.84
LTBP3-201ENST00000301873 PPIGQ13427 754 aaKnown RBP eCLIP20.31■□□□□ 0.841e-7■■□□□ 14.2
LTBP3-201ENST00000301873 FAAH2Q6GMR7 532 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.31■□□□□ 0.84
LTBP3-201ENST00000301873 TMEM40Q8WWA1 233 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 TSGA13Q96PP4 275 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 PHF12Q96QT6 1004 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 TRMT61BQ9BVS5 477 aaKnown RBP20.31■□□□□ 0.84
LTBP3-201ENST00000301873 STRA6Q9BX79 667 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 MOCS1Q9NZB8 636 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 ACTR3BQ9P1U1 418 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 STON1Q9Y6Q2 735 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 CLK3P49761 638 aaKnown RBP20.31■□□□□ 0.84
LTBP3-201ENST00000301873 PNLIPRP1P54315 467 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 UPP1Q16831 310 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 MYLK3Q32MK0 819 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 CDH24Q86UP0 819 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 OR10T2Q8NGX3 314 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 GPR62Q9BZJ7 368 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 RACGAP1Q9H0H5 632 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 ITM2CQ9NQX7 267 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 TDP1Q9NUW8 608 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 FZD4Q9ULV1 537 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 NDRG2Q9UN36 371 aaKnown RBP20.31■□□□□ 0.84
LTBP3-201ENST00000301873 GABRQQ9UN88 632 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 RNF11Q9Y3C5 154 aa20.31■□□□□ 0.84
LTBP3-201ENST00000301873 PARP4Q9UKK3 1724 aaKnown RBP20.31■□□□□ 0.84
LTBP3-201ENST00000301873 IGKV6-21A0A0C4DH24 114 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 H3BSA7 217 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 SLC30A4O14863 429 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 PDPK1O15530 556 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 CLCNKAP51800 687 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 PCBP2Q15366 365 aaKnown RBP eCLIP20.3■□□□□ 0.849e-7■■■□□ 18.3
LTBP3-201ENST00000301873 FAM91A1Q658Y4 838 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 PNPLA1Q8N8W4 532 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 SLC35G5Q96KT7 338 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 NSUN5Q96P11 429 aaKnown RBP20.3■□□□□ 0.84
LTBP3-201ENST00000301873 OR1I1O60431 355 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 STATHP02808 62 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 PRKAR1AP10644 381 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 CDH1P12830 882 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 OMPP47874 163 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 GOLGA7Q7Z5G4 137 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 CLIP4Q8N3C7 705 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 RASSF5Q8WWW0 418 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 DERL2Q9GZP9 239 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 TBC1D17Q9HA65 648 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 GPC6Q9Y625 555 aaPredicted RBP20.3■□□□□ 0.84
LTBP3-201ENST00000301873 KLK1P06870 262 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 CBX3Q13185 183 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 LAPTM4AQ15012 233 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 SMG8Q8ND04 991 aaKnown RBP20.3■□□□□ 0.84
LTBP3-201ENST00000301873 SLC22A17Q8WUG5 538 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 C5orf34Q96MH7 638 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 PKP4Q99569 1192 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 FLRT1Q9NZU1 646 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 INPPL1O15357 1258 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 IL18Q14116 193 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.3■□□□□ 0.841e-8■■■■□ 21.3
LTBP3-201ENST00000301873 FAM92BQ6ZTR7 304 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 TMEM135Q86UB9 458 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 RAB2BQ8WUD1 216 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 IPCEF1Q8WWN9 437 aaPredicted RBP20.3■□□□□ 0.84
LTBP3-201ENST00000301873 SCAMP4Q969E2 229 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 POLR2J2Q9GZM3 115 aaKnown RBP20.3■□□□□ 0.84
LTBP3-201ENST00000301873 SRMSQ9H3Y6 488 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 B4GALT6Q9UBX8 382 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 SLC45A1Q9Y2W3 748 aa20.3■□□□□ 0.84
LTBP3-201ENST00000301873 CLDN4O14493 209 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 ALOX5P09917 674 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 ATP1B2P14415 290 aaPredicted RBP20.29■□□□□ 0.84
LTBP3-201ENST00000301873 PCSK2P16519 638 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 ZNF24P17028 368 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 CPN2P22792 545 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 ZNF678Q5SXM1 525 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 GALNT15Q8N3T1 639 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 OR10G2Q8NGC3 310 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 IGSF8Q969P0 613 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 OR51B5Q9H339 312 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 RBMX2Q9Y388 322 aaKnown RBP20.29■□□□□ 0.84
LTBP3-201ENST00000301873 DCLK1O15075 740 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 CCNKO75909 580 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 BCAS2O75934 225 aaPredicted RBP20.29■□□□□ 0.84
LTBP3-201ENST00000301873 NUDT6P53370 316 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 LY6G5CQ5SRR4 150 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 AHI1Q8N157 1196 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 PRR11Q96HE9 360 aaPredicted RBP20.29■□□□□ 0.84
LTBP3-201ENST00000301873 UBE2QL1A1L167 161 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 PAPSS2O95340 614 aaPredicted RBP20.29■□□□□ 0.84
LTBP3-201ENST00000301873 LRRC32Q14392 662 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 GPRC6AQ5T6X5 926 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 NEK5Q6P3R8 708 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 BRAT1Q6PJG6 821 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 C7orf61Q8IZ16 206 aa20.29■□□□□ 0.84
LTBP3-201ENST00000301873 DCAF4L2Q8NA75 395 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms