RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SCGB2B2Q4G0G5 96 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CLEC20AQ6ZU45 233 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LYSMD3Q7Z3D4 306 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PROKR2Q8NFJ6 384 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TRIM2Q9C040 744 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RWDD3Q9Y3V2 267 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ARHGEF28Q8N1W1 1705 aaKnown RBP13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ATRNL1Q5VV63 1379 aa13.29□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ELOA3DA6NLF2 546 aaPredicted RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 AGPSO00116 658 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PRMT3O60678 531 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NSG1P42857 185 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 YBEYP58557 167 aaPredicted RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SLC3A1Q07837 685 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CHRNA6Q15825 494 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ELOA3BQ3SY89 546 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZNF311Q5JNZ3 666 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NCBP2-AS2Q69YL0 99 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 HFE2Q6ZVN8 426 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SVOPLQ8N434 492 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZBTB8BQ8NAP8 495 aaPredicted RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ELOA3Q8NG57 546 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NFKBIDQ8NI38 313 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LGR4Q9BXB1 951 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NPHS1O60500 1241 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 JUNP05412 331 aaKnown RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PAX3P23760 479 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GKP32189 559 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ACTR1BP42025 376 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ACTR1AP61163 376 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PTPRCAPQ14761 206 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MAPK14Q16539 360 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TIGD6Q17RP2 521 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 KLHL26Q53HC5 615 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DCAF12L1Q5VU92 463 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GIN1Q9NXP7 522 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RHCGQ9UBD6 479 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZNF69Q9UC07 566 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NRP1O14786 923 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DUSP11O75319 330 aaKnown RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PUS10Q3MIT2 529 aaKnown RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CWF19L1Q69YN2 538 aaKnown RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ADNP2Q6IQ32 1131 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LBX2Q6XYB7 198 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 OR10G2Q8NGC3 310 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 HCN3Q9P1Z3 774 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TAC3Q9UHF0 121 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SLC22A14Q9Y267 594 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TNFRSF10BO14763 440 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZNF20P17024 532 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GPD2P43304 727 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PHF19Q5T6S3 580 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SRFBP1Q8NEF9 429 aaKnown RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ROPN1LQ96C74 230 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 C8orf48Q96LL4 319 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 COL21A1Q96P44 957 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 KCNA7Q96RP8 456 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 AKTIPQ9H8T0 292 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SIX2Q9NPC8 291 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZDHHC2Q9UIJ5 367 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MAN2B2Q9Y2E5 1009 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PLGP00747 810 aaPredicted RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ASLP04424 464 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GPIP06744 558 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 AP1S1P61966 158 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 OC90Q02509 493 aaPredicted RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SYT16Q17RD7 645 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LACTB2Q53H82 288 aaPredicted RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PIK3R3Q92569 461 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RNF39Q9H2S5 420 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TTYH1Q9H313 450 aaPredicted RBP13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 KCTD3Q9Y597 815 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ATRNO75882 1429 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PPLO60437 1756 aa13.28□□□□□ -0.28
CHRFAM7A-201ENST00000299847 OR1I1O60431 355 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CLDN7O95471 211 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RENP00797 406 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SCN1BQ07699 218 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 C1orf94Q6P1W5 598 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZSWIM3Q96MP5 696 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 POLR2J2Q9GZM3 115 aaKnown RBP13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GDAP2Q9NXN4 497 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZNF806P0C7X5 589 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 OR12D2P58182 307 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DCDC1P59894 354 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 C4orf46Q504U0 113 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 Q6ZVU0 165 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 HIST1H2AAQ96QV6 131 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 OR52B2Q96RD2 323 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 OSBPL7Q9BZF2 842 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 MOCS1Q9NZB8 636 aa13.27□□□□□ -0.28
CHRFAM7A-201ENST00000299847 K7EPI3 171 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ESR1P03372 595 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GDI1P31150 447 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PDX1P52945 283 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HERVK_113P63132 956 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ID2Q02363 134 aa13.27□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GALNT15Q8N3T1 639 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms