RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 GGTA1PQ4G0N0 100 aa24.89■■□□□ 1.57
SDCCAG3-201ENST00000298537 SDE2Q6IQ49 451 aa24.89■■□□□ 1.57
SDCCAG3-201ENST00000298537 SYTL1Q8IYJ3 562 aa24.89■■□□□ 1.57
SDCCAG3-201ENST00000298537 OR56A3Q8NH54 315 aa24.89■■□□□ 1.57
SDCCAG3-201ENST00000298537 APIPQ96GX9 242 aa24.89■■□□□ 1.57
SDCCAG3-201ENST00000298537 ZNF514Q96K75 400 aaPredicted RBP24.89■■□□□ 1.57
SDCCAG3-201ENST00000298537 WDR26Q9H7D7 661 aa24.89■■□□□ 1.57
SDCCAG3-201ENST00000298537 MRPL40Q9NQ50 206 aaKnown RBP24.89■■□□□ 1.57
SDCCAG3-201ENST00000298537 PLEKHM1Q9Y4G2 1056 aa24.89■■□□□ 1.57
SDCCAG3-201ENST00000298537 TBC1D3DA0A087WVF3 549 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TBC1D3IA0A087WXS9 549 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TBC1D3EA0A087X179 549 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TBC1D3KA0A087X1G2 549 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 C17orf113A0A1B0GUU1 675 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TBC1D3FA6NER0 549 aaPredicted RBP24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 BBIP1A8MTZ0 92 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TBC1D3LB9A6J9 549 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 H3BNX3 289 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 SLC31A1O15431 190 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TBC1D3HP0C7X1 549 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 PRKG2Q13237 762 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TMEM259Q4ZIN3 620 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TBC1D3GQ6DHY5 549 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TBC1D3CQ6IPX1 549 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TTC23LQ6PF05 361 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 KBTBD6Q86V97 674 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 AMZ2Q86W34 360 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 ZFAND4Q86XD8 727 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TBC1D3Q8IZP1 549 aaPredicted RBP24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 RPLP0P6Q8NHW5 317 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 MTERF1Q99551 399 aaKnown RBP24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 C1QTNF2Q9BXJ5 285 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 CD300AQ9UGN4 299 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 C15orf41Q9Y2V0 281 aa24.88■■□□□ 1.57
SDCCAG3-201ENST00000298537 TRIM38O00635 465 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 MRPS22P82650 360 aaKnown RBP24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 DDX39BQ13838 428 aaKnown RBP24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 PCYOX1LQ8NBM8 494 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 DNAJB14Q8TBM8 379 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 NEIL2Q969S2 332 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 LRRC58Q96CX6 371 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 SLC17A9Q9BYT1 436 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 CMTM6Q9NX76 183 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 CA5BQ9Y2D0 317 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 JUPP14923 745 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 IGFALSP35858 605 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 TRIM23P36406 574 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 AP2B1P63010 937 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 GRIK2Q13002 908 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 CATSPEREQ5SY80 951 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 WLSQ5T9L3 541 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 DUS1LQ6P1R4 473 aaKnown RBP24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 HACD2Q6Y1H2 254 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 LRRC74BQ6ZQY2 392 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 CHST15Q7LFX5 561 aaPredicted RBP24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 LRRTM4Q86VH4 590 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 RALGPS2Q86X27 583 aaPredicted RBP24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 SNX6Q9UNH7 406 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 ASF1AQ9Y294 204 aa24.87■■□□□ 1.57
SDCCAG3-201ENST00000298537 FAM234BA2RU67 622 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 SLC6A2P23975 617 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 TACR1P25103 407 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 RPS21P63220 83 aaKnown RBP24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 RABL3Q5HYI8 236 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 FRG2Q64ET8 278 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 SLC15A3Q8IY34 581 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 ROPN1LQ96C74 230 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 FRG2BQ96QU4 278 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 C1orf109Q9NX04 203 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 STOML1Q9UBI4 398 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 SOX11P35716 441 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 GRSF1Q12849 480 aaKnown RBP eCLIP24.86■■□□□ 1.576e-6■□□□□ 8.8
SDCCAG3-201ENST00000298537 SGCGQ13326 291 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 NFYCQ13952 458 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 ATL1Q8WXF7 558 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 FAM131CQ96AQ9 280 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 SIPA1Q96FS4 1042 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 CAAP1Q9H8G2 361 aa24.86■■□□□ 1.57
SDCCAG3-201ENST00000298537 EEDO75530 441 aaKnown RBP24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 BCKDHAP12694 445 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 AGERQ15109 404 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 TCEA2Q15560 299 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 C6orf10Q5SRN2 563 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 RNF165Q6ZSG1 346 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 OR9A1PQ8NGU1 263 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 MRGPRX1Q96LB2 322 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 TMEM74Q96NL1 305 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 DPEP2Q9H4A9 486 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 NMRK1Q9NWW6 199 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 WDR37Q9Y2I8 494 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 IFRD1O00458 451 aaPredicted RBP24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 ACP5P13686 325 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 USP39Q53GS9 565 aaKnown RBP24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 CYP2R1Q6VVX0 501 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 KBTBD2Q8IY47 623 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 LRRC56Q8IYG6 542 aaPredicted RBP24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 KIAA2013Q8IYS2 634 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 WDR20Q8TBZ3 569 aa24.85■■□□□ 1.57
SDCCAG3-201ENST00000298537 TDRKHQ9Y2W6 561 aaKnown RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms