RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 NDST3O95803 873 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 RFX3P48380 749 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 NRLP54845 237 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 WNT3AP56704 352 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 TBC1D25Q3MII6 688 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 CIR1Q86X95 450 aaPredicted RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 GALNT13Q8IUC8 556 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 CLEC4CQ8WTT0 213 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 ASB12Q8WXK4 309 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 PRICKLE1Q96MT3 831 aaPredicted RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 XYLT2Q9H1B5 865 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 FBRSQ9HAH7 460 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 INTS10Q9NVR2 710 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 HCFC2Q9Y5Z7 792 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 H3BNH8 94 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 OR10H3O60404 316 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 CHRM5P08912 532 aaPredicted RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 KCNQ1P51787 676 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 RPS24P62847 133 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 CTC1Q2NKJ3 1217 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 FBXL22Q6P050 247 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 ERMP1Q7Z2K6 904 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 ZNF614Q8N883 585 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 EEF1AKMT1Q8WVE0 214 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 ATL1Q8WXF7 558 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 UTP4Q969X6 686 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 PDCD10Q9BUL8 212 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 CCDC177Q9NQR7 707 aaPredicted RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 GULP1Q9UBP9 304 aa11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 SUCOQ9UBS9 1254 aaKnown RBP11.14□□□□□ -0.63
NPC1L1-201ENST00000289547 FER1L6Q2WGJ9 1857 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 IL7RP16871 459 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 ITGA2P17301 1181 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 AQP1P29972 269 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 HOXD13P35453 343 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 HCAR3P49019 387 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 MAZP56270 477 aaKnown RBP11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 PPP1R8Q12972 351 aaKnown RBP11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 ZNF404Q494X3 552 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 MS4A13Q5J8X5 152 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 SLC8B1Q6J4K2 584 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 ANKRD54Q6NXT1 300 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 ZNF613Q6PF04 617 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 SVOPLQ8N434 492 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 SPPL3Q8TCT6 385 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 STON2Q8WXE9 905 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 MRPL48Q96GC5 212 aaKnown RBP11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 RPL10LQ96L21 214 aaKnown RBP11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 CYP2S1Q96SQ9 504 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 SMG9Q9H0W8 520 aaKnown RBP11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 DENRO43583 198 aaKnown RBP11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 LRATO95237 230 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 T-ENOLP0DO92 83 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 UNGP13051 313 aaPredicted RBP11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 IDSP22304 550 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 GALNT3Q14435 633 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 TIGD6Q17RP2 521 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 SYPL2Q5VXT5 272 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 ZNF783Q6ZMS7 281 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 TRPV3Q8NET8 790 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 SLC35B2Q8TB61 432 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 FAM3CQ92520 227 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 REPS1Q96D71 796 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 SACM1LQ9NTJ5 587 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 SLC17A6Q9P2U8 582 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 ABCG2Q9UNQ0 655 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 LILRB3O75022 631 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 ABCB7O75027 752 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 KDM4BO94953 1096 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 KLF8O95600 359 aaPredicted RBP11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 RAP2AP10114 183 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 OXTRP30559 389 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 PTPRNQ16849 979 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 HKDC1Q2TB90 917 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 HMBOX1Q6NT76 420 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 AP2M1Q96CW1 435 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 SLC25A51Q9H1U9 297 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 RDH8Q9NYR8 311 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 AHSPQ9NZD4 102 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 EIF3KQ9UBQ5 218 aaKnown RBP11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 CLEC4AQ9UMR7 237 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 PCCBP05166 539 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 SPAM1P38567 509 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 TMBIM6P55061 237 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 VBP1P61758 197 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 MSS51Q4VC12 460 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 TMEM126BQ8IUX1 230 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 RBFAQ8N0V3 343 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 CLHC1Q8NHS4 586 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 TMIGD2Q96BF3 282 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 ZBP1Q9H171 429 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 SLC2A4RGQ9NR83 387 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 DNAJB9Q9UBS3 223 aa11.13□□□□□ -0.63
NPC1L1-201ENST00000289547 HOXB6P17509 224 aaKnown RBP11.12□□□□□ -0.63
NPC1L1-201ENST00000289547 DRD1P21728 446 aa11.12□□□□□ -0.63
NPC1L1-201ENST00000289547 PIK3CGP48736 1102 aa11.12□□□□□ -0.63
NPC1L1-201ENST00000289547 ARRB1P49407 418 aaPredicted RBP11.12□□□□□ -0.63
NPC1L1-201ENST00000289547 E2F2Q14209 437 aa11.12□□□□□ -0.63
NPC1L1-201ENST00000289547 PON2Q15165 354 aa11.12□□□□□ -0.63
NPC1L1-201ENST00000289547 TBRG1Q3YBR2 411 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms