RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 BROXQ5VW32 411 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 UBE2R2Q712K3 238 aaPredicted RBP24.41■■□□□ 1.5
ROM1-201ENST00000278833 GAREM2Q75VX8 874 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 TDHQ8IZJ6 230 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 C8orf59Q8N0T1 100 aaPredicted RBP24.41■■□□□ 1.5
ROM1-201ENST00000278833 EID3Q8N140 333 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 ASB11Q8WXH4 323 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 COG8Q96MW5 612 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 MBOAT4Q96T53 435 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 CDC14AQ9UNH5 594 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 GMEB1Q9Y692 573 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 PLXNA2O75051 1894 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 GFYI3L273 518 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 KPNA5O15131 536 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 LILRB3O75022 631 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 ABCB7O75027 752 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 CST1P01037 141 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 LHCGRP22888 699 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 GABRR2P28476 465 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 TMBIM6P55061 237 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 C21orf58P58505 322 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 MTAPQ13126 283 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 TOP3AQ13472 1001 aaPredicted RBP24.41■■□□□ 1.5
ROM1-201ENST00000278833 IL18R1Q13478 541 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 DPY19L1Q2PZI1 675 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 ATP13A5Q4VNC0 1218 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 MBOAT1Q6ZNC8 495 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 ELMOD1Q8N336 334 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 PAF1Q8N7H5 531 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 FAM81AQ8TBF8 368 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 MAGED4Q96JG8 741 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 EMILIN2Q9BXX0 1053 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 SOX17Q9H6I2 414 aaPredicted RBP24.41■■□□□ 1.5
ROM1-201ENST00000278833 LIN28AQ9H9Z2 209 aaKnown RBP24.41■■□□□ 1.5
ROM1-201ENST00000278833 FAM118AQ9NWS6 357 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 PCDHB14Q9Y5E9 798 aa24.41■■□□□ 1.5
ROM1-201ENST00000278833 UGDHO60701 494 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 EFCAB14O75071 495 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 SEC14L2O76054 403 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 C1SP09871 688 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 S100A3P33764 101 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 PHC1P78364 1004 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 DEFB103AP81534 67 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 SKIV2LQ15477 1246 aaKnown RBP24.4■■□□□ 1.5
ROM1-201ENST00000278833 FAM117BQ6P1L5 589 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 DRAXINQ8NBI3 349 aaPredicted RBP24.4■■□□□ 1.5
ROM1-201ENST00000278833 FBXO30Q8TB52 745 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 SELENOMQ8WWX9 145 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 ASIC4Q96FT7 647 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 GABARAPL1Q9H0R8 117 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 TOR3AQ9H497 397 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 PLGRKTQ9HBL7 147 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 NFKBIL1Q9UBC1 381 aaPredicted RBP24.4■■□□□ 1.5
ROM1-201ENST00000278833 DLGAP4Q9Y2H0 992 aa24.4■■□□□ 1.5
ROM1-201ENST00000278833 TRAV19A0A0A6YYK7 116 aa24.39■■□□□ 1.5
ROM1-201ENST00000278833 CRHBPP24387 322 aa24.39■■□□□ 1.5
ROM1-201ENST00000278833 CYP4F8P98187 520 aa24.39■■□□□ 1.5
ROM1-201ENST00000278833 KCNC3Q14003 757 aa24.39■■□□□ 1.5
ROM1-201ENST00000278833 SPOUT1Q5T280 376 aaKnown RBP24.39■■□□□ 1.5
ROM1-201ENST00000278833 KLHDC8AQ8IYD2 350 aa24.39■■□□□ 1.5
ROM1-201ENST00000278833 FAM83CQ9BQN1 747 aa24.39■■□□□ 1.5
ROM1-201ENST00000278833 MTIF3Q9H2K0 278 aaKnown RBP24.39■■□□□ 1.5
ROM1-201ENST00000278833 PER2O15055 1255 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 DNAJB5O75953 348 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 PRKD3O94806 890 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 CKMP06732 381 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 GSTM2P28161 218 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 SPINT3P49223 89 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 DCDC1P59894 354 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 ABRQ12979 859 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 TMCO2Q7Z6W1 182 aaPredicted RBP24.38■■□□□ 1.49
ROM1-201ENST00000278833 CSGALNACT1Q8TDX6 532 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 FAM120BQ96EK7 910 aaKnown RBP24.38■■□□□ 1.49
ROM1-201ENST00000278833 METTL2AQ96IZ6 378 aaKnown RBP24.38■■□□□ 1.49
ROM1-201ENST00000278833 ELOVL6Q9H5J4 265 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 NAALAD2Q9Y3Q0 740 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 WASH3PC4AMC7 463 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 AP2A2O94973 939 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 POP4O95707 220 aaKnown RBP24.38■■□□□ 1.49
ROM1-201ENST00000278833 SDC1P18827 310 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 TRPC1P48995 793 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 PLCL1Q15111 1095 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 ZXDCQ2QGD7 858 aaPredicted RBP24.38■■□□□ 1.49
ROM1-201ENST00000278833 GTDC1Q4AE62 458 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 SGO1Q5FBB7 561 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 HIPK1Q86Z02 1210 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 ZNF555Q8NEP9 628 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 FBLIM1Q8WUP2 373 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 ING2Q9H160 280 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 DNAJC11Q9NVH1 559 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 C3orf18Q9UK00 162 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 BLOC1S6Q9UL45 172 aa24.38■■□□□ 1.49
ROM1-201ENST00000278833 TEX28O15482 410 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 ATE1O95260 518 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 HIST1H2AGP0C0S8 130 aaPredicted RBP24.37■■□□□ 1.49
ROM1-201ENST00000278833 PCNAP12004 261 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 ZNF30P17039 623 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 HIST1H2ADP20671 130 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 CYP2A7P20853 494 aa24.37■■□□□ 1.49
ROM1-201ENST00000278833 PCDH1Q08174 1060 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms